| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4078 |
|---|
| Symbol | |
|---|
| ID | 5318944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 538967 |
|---|
| End bp | 539746 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640775885 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001312818 |
|---|
| Protein GI | 150376222 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTC GCAACCACCA TCTGAAGGAT GACATCCGCG AATACTGGTC GAAGCGGTCG
GAAACCTTCG ACCTCGCTTT CGGTCATCGC ATTCCACGTG GGCCGGAGTT CGACGCCTGG
GCGGCGGCGG TGCGGAGCGC ACTTGGGGCA AGGCCGCTGA AGGTTCTCGA ACTCGCATGC
GGGACGGGCG AAGTGACCGG CGTGCTGCTT TCGCTCGGGC ATGACGTGAC CGCGCTCGAT
TTCTCCGAGA CCATGCTCGC GGTCGCGCGG CGCAAACATG CCGGGAACGA TAAGGTCCGC
TTCATACTGG CCGATGCCGA ACGCACGATG GAGCCGGACG GAACCTATGA CGCCGTGGTC
TGCCGGCACC TTGTCTGGAC CCTCACCGAG CCGGAACAGG CGCTTGCAGA GTGGCTCCGC
CTGCTGAAGC CCGGCGGCAG GCTGCTCGTC TTCGATGGGG ACTGGTCGAA GCCTACGCCG
CTCGGTCGGC TGGCCTCGCT TGCGGTGGCT GCCCTCGAGC GCATCATCGG GTACGACCCG
CATTATGACG GGGCCATGAG CGAACGCCAC GCGAAGATCA TGGAGCGTCT GCCCTTCGGC
GACGGTCTCA CAGTCGAAAG GCTTGTGCCT CTGATCGAGG CCGCCGGCTT TGAAAACATC
TTGCTGCCGT CCCGCCGGCC GATTGCGGCT GCCCAGCGCA GGAATGCAGA CCTTAGAAAC
AGGCTGAGAA CATTTTTCTA CCGCCGGTTC GTCCTCGTCT GTTCGAGGCC GTCGGGGTAA
|
|---|
| Protein sequence | MDIRNHHLKD DIREYWSKRS ETFDLAFGHR IPRGPEFDAW AAAVRSALGA RPLKVLELAC
GTGEVTGVLL SLGHDVTALD FSETMLAVAR RKHAGNDKVR FILADAERTM EPDGTYDAVV
CRHLVWTLTE PEQALAEWLR LLKPGGRLLV FDGDWSKPTP LGRLASLAVA ALERIIGYDP
HYDGAMSERH AKIMERLPFG DGLTVERLVP LIEAAGFENI LLPSRRPIAA AQRRNADLRN
RLRTFFYRRF VLVCSRPSG
|
|---|
| |