| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4077 |
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| Symbol | |
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| ID | 5318943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 537976 |
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| End bp | 538875 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640775884 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001312817 |
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| Protein GI | 150376221 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT ACAAAGCTTT GAAAATCTTT CTCCTCGCTG CCGAAAAGCG GAATTTCGCG
CAGGTCGCGC GCGAGTTGGA CATGACGCCA GCCGGTGTCA CACGCGCGAT AGCCGCCCTG
GAATATGACC TTGGCATCCA ACTCTTCGTG CGAACGACCA GGCAAGTTTC GCTGACGACA
GACGGTGCCA TCTTTGCCGC TCAGGTCCAG CCAGCCGTTG CTGTCCTCGA TAATGCGCGA
CGCGACGTCA GGAATGCGAA CAAGGCCGAT CAGGGGCGAC TGAGGATTAG CGCCCCAACA
TGGCTCGGCA AGACCATTCT GCCGCCCATC CTTTCAGGCT TTCGCGAACT TTATCCGAAG
ATGAGTTTCG AGATCTCGTT GTCGGATGGG CTGGTCGACA TCGTCGACGG TGACTACGAT
CTGGCAATCC GCATATCGTC GGCTCCATCT GACAAGTTCA CGATCTGGCG CAAGATCAGC
GTCGTCCGAC GAGTCCTGGT CGCGGCACCG GGAAGCCGAT TCCATGCTAT GGAGCATCCT
GGCCAGTTGT CGCCCGACGA CTGTCTGGCC TATAGCGGCG AGAGCCGACG CGAAACCTGG
GTGCTTTCTG ACGGCGGATC CAGCATGACG ATTTCAGCCG GCCGCGCATT CAGCGCCAAC
AGTGGAGAGG TGCTGGCCGA TATGGCGGCT GATGGTGCCG GTGTCGCAAT GCTGCCGGGC
TTCCACGTCG CCGAACATCT GCGAACCGGA AGGTTGGTTC ATATCCTTCG CGAGTGGTCG
CCGCAGGATC TGTGGCTCAC ACTGTACTAT CCGCCCTACC AGGCGCTACC GCCCCGCATC
GCATCCTTCT CGAAATTCTT CGAACGGCAG CTCCCAGCGC ACATGGCAAT GCTGGAATAG
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| Protein sequence | MNDYKALKIF LLAAEKRNFA QVARELDMTP AGVTRAIAAL EYDLGIQLFV RTTRQVSLTT
DGAIFAAQVQ PAVAVLDNAR RDVRNANKAD QGRLRISAPT WLGKTILPPI LSGFRELYPK
MSFEISLSDG LVDIVDGDYD LAIRISSAPS DKFTIWRKIS VVRRVLVAAP GSRFHAMEHP
GQLSPDDCLA YSGESRRETW VLSDGGSSMT ISAGRAFSAN SGEVLADMAA DGAGVAMLPG
FHVAEHLRTG RLVHILREWS PQDLWLTLYY PPYQALPPRI ASFSKFFERQ LPAHMAMLE
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