| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4064 |
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| Symbol | |
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| ID | 5317893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 525933 |
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| End bp | 526790 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775871 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001312804 |
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| Protein GI | 150376208 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAT TTCCGCAGCC TCCCTTCCCC CGCCAAAAGC AGGAAATGCC TGGCACCACC
GACCAGATGC AGCCGCTTCC CGACCACGGT GAGAACTCTT ACCAGGGCTC CGGACGCTTG
AGAGACAAGA GAGCCATCAT CACCGGCGGG GACAGCGGTA TCGGCAGAGC CGTGGCGCTC
GCCTTCGCCC GGGAGGGAGC GGATGTCCTT ATCAGCTATC TGAGCGAGCA TGAAGACGCC
ATGGCCACCA AGGCCCTGGT GGAGGAAGCG GGCCGCAAGG CAGTCCTCGC CGCGGGCGAC
ATCCAATCTT CCGACCATTG CCGGCGGATC GTCGAAACGG CGGTCCGGGA ACTCGGCGGT
GTCGATATTC TCGTCAACAA CGCGGCCCAC CAGGCCTCTT TCAAGAACAT CGAGGATATA
AGCGACGAGG AATGGGAGCT GACATTCCGG GTGAACATGC ACGCGATGTT CTACCTGACC
AAGGCAGCCG TGCCGCACAT GAAGAAGGGC AGCGTCATCA TCAATACAGC TTCCATCAAT
GCCGACGTCC CGAACCCGAT CCTGCTTGCC TATGCCACGA CGAAAGGCGC GATCCACAAT
TTCAGTGCCG GTCTCGCGCA GATGCTGGCC GAGCGCGGGA TAAGAGTGAA TGTCGTAGCG
CCCGGTCCGA TCTGGACCCC GCTGATCCCC TCCACCATGC CCGAGGATAG CGTCGCCAAC
TTCGGCAAGC AGGTGCCGAT GAAACGTCCG GGGCAGCCGG TAGAACTCGC CTCGGCCTAC
GTAATGCTCG CGGATCCGAT GTCGAGTTAC GTATCCGGCG CGACCATCGC GGTGACCGGC
GGAAAGCCTT TCCTGTGA
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| Protein sequence | MERFPQPPFP RQKQEMPGTT DQMQPLPDHG ENSYQGSGRL RDKRAIITGG DSGIGRAVAL
AFAREGADVL ISYLSEHEDA MATKALVEEA GRKAVLAAGD IQSSDHCRRI VETAVRELGG
VDILVNNAAH QASFKNIEDI SDEEWELTFR VNMHAMFYLT KAAVPHMKKG SVIINTASIN
ADVPNPILLA YATTKGAIHN FSAGLAQMLA ERGIRVNVVA PGPIWTPLIP STMPEDSVAN
FGKQVPMKRP GQPVELASAY VMLADPMSSY VSGATIAVTG GKPFL
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