| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4048 |
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| Symbol | |
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| ID | 5318615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 510148 |
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| End bp | 512130 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775856 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_001312789 |
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| Protein GI | 150376193 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only |
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| COG ID | [COG2312] Erythromycin esterase homolog
[COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATT TTTCCAGAGC CCGCGAACGC ATGATCGCGT CGCACCTCTC GCGGAGGGGA
ATTAGGAACG ACCATGTGGT GAAAGCGATG CGCGTCGTTC CGCGGGAGGC CTTTGTGGAC
CCGGGCTTCG AAGAGTTCGC CTACGAGGAT TCGGCGTTGT CGATCGGCCA CGGCCAGACG
ATTTCGCAGC CCTATATCGT GGCGCTGATG ATAGAGCGAG CCGAGGTTCA GCCCGGCGAC
ACGGTGCTCG AAATCGGAAC CGGATCCGGT TATGCAGCCG CAGTGCTCAG CCGGATCGCG
GCACATGTCT ATACGATGGA GCGCCATGCA GGGCTCGCCA GGATCGCCGG GCAGCGCTTT
GCCGACCTCC GCTACAAGAA TATCGATGTC CGCGTCGGCG ACGGTACCAC CGGTTGGCCG
GAAGCAGGCC CCTTCGACGC CATACTGGTT GCGGCTGGAA GTCCCGAGAT ACCGTATGCG
CTGAAGCAGC AACTCGATCT TGGCGGCCAC CTCGTCATCC CCGTCGGGCC GCCGGACGAA
CAGCGCCTGC TGAAGGTCAC GCGCGTGAGT GCCACGACGT TTAAGGAGCA GGACCTCGGT
GGTGTAAGGT TTGTGCCGCT AATCGGCGAA TATGGCTGGC ACGACGAGCG GGCGGAGCCC
CGGGCAAGGC AGAGCCTCAG GCCGGCCCCC ACTCTGTCGC AGATGGTGGC GTCGGCGGCC
GAACCGCTGC CCGCCTTCGA CGATCCGGCC TTCGGGCGGC TTTTCGATAG ATTCGCCGGG
CGGCGGGTCG TGCTGCTCGG AGAAGCAAGC CACGGCACGT CGGAATTTTA TCGTGCCCGC
GCGGCCATCA CGCGCCGTCT GATCGAGGAA CATGGATTTA CGATCGTGGC GGTCGAGGCG
GATTGGCCGG ATGCCGCAGC GATCGACCGC TATGTTCGCC ACCGAGCGCC GGGCATGCTA
CAGGACGCGC CCTTCCAGCG GTTCCCGGTT TGGATGTGGC GCAACCGCGA AGTGATGGAG
TTCGTGGAAT GGATGCGCGA GCTCAACGGC AGCAGGGAGG CCTCCGATCG GGCCGGCTTC
CATGGGCTCG ACATTTATAA CATCCGCGGC TCCATTGCCG CCGTCCTGCG ATATCTTGAC
CAGACCGATC CACAAGCGGC TGCAGTTGCC CGCGCGCGCT ACGGGTGTCT CACGCCCTGG
CAGAACGAAC CATCGACGTA TGGCCGTGCT GCGATGACGG CAGGCTTCCG CAAATGCGAG
GAAGCCGTCG TCGAGCAATG CCGGGAACTT CTGGAGAAGC AGCTCGAAGC CGGCCGCGGT
AGCGGCGACG AGCTTCTCGA CGCGGTACAG AATGCGCGGC TGGTGGCCTC GGCCGAGCGC
TATTACAGGA TCATGTATTA TGCCGGGCCT GACTCCTGGA ACATGCGTGA CAGCCATATG
TTCGAGACGC TCGAGCACCT GTTGAACGCG CGCGGCGATC AATCGAAGGC GGTCGTGTGG
GCGCACAACT CTCATATCGG CGACGCCCGC CACACCGACA TGGGTACTGC CCGCGAGGAG
TTGAACATCG GCCAGCTCTG CCGTGAGCGC TACGGCGATC AGGCTGTGCT GATCGGCTTC
GGCACGCATA GCGGCCGTGT GGCTGCCGCA AGCGATTGGG ATGGCGACAT GGAAGTGAAG
ACTATCCGGG CCTCGCTCGA AGGGAGCTAC GAGCGTGTGC TTCACGACTC AGGCGTAGCG
CGCTTCCTCA TCGATTTTGC CCGCCACGCG CCCCTGAGCG AATGCCTTCT CAAGCCGATG
CTCGAGCGCT TCATCGGAGT CATCTACCGA CCGGAAACGG AACGGTTGAG CCATTATTCC
CACGCCTCGC TGCCGCGGCA GTTCGATGCA TTCGTCTGGT TCGATGAAAC GAACCCGGTC
GAGCCGCTCG GACCTGAACA CACAAGGGCC GGCGTGCCCG ATACATTTCC GTTCGGTTTG
TGA
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| Protein sequence | MIDFSRARER MIASHLSRRG IRNDHVVKAM RVVPREAFVD PGFEEFAYED SALSIGHGQT
ISQPYIVALM IERAEVQPGD TVLEIGTGSG YAAAVLSRIA AHVYTMERHA GLARIAGQRF
ADLRYKNIDV RVGDGTTGWP EAGPFDAILV AAGSPEIPYA LKQQLDLGGH LVIPVGPPDE
QRLLKVTRVS ATTFKEQDLG GVRFVPLIGE YGWHDERAEP RARQSLRPAP TLSQMVASAA
EPLPAFDDPA FGRLFDRFAG RRVVLLGEAS HGTSEFYRAR AAITRRLIEE HGFTIVAVEA
DWPDAAAIDR YVRHRAPGML QDAPFQRFPV WMWRNREVME FVEWMRELNG SREASDRAGF
HGLDIYNIRG SIAAVLRYLD QTDPQAAAVA RARYGCLTPW QNEPSTYGRA AMTAGFRKCE
EAVVEQCREL LEKQLEAGRG SGDELLDAVQ NARLVASAER YYRIMYYAGP DSWNMRDSHM
FETLEHLLNA RGDQSKAVVW AHNSHIGDAR HTDMGTAREE LNIGQLCRER YGDQAVLIGF
GTHSGRVAAA SDWDGDMEVK TIRASLEGSY ERVLHDSGVA RFLIDFARHA PLSECLLKPM
LERFIGVIYR PETERLSHYS HASLPRQFDA FVWFDETNPV EPLGPEHTRA GVPDTFPFGL
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