Gene Smed_4044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4044 
Symbol 
ID5318611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp507049 
End bp507990 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content59% 
IMG OID640775852 
Producthypothetical protein 
Protein accessionYP_001312785 
Protein GI150376189 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGA AAATACTAGC GAGGCTGTTC ATAGCGGCGG GTATCGCGGT GGCGGGCTGG 
CTGATCTATC GAACGCTTAG CCAGCATAGT TTCAATGAGA TCGTCGGTTC GATCATGCGG
ATTCCTGGCC GGGATCTCTT TGCAGGCATC GGTTTCGTCT TTCTTTCCTA TTTCTGCCTG
ACGCTGTTCG ACACTCTCGC CATTCGCTAT GTCGGGCGAA AGCTCCCCTA TCCGCAAATC
GCCATCGCTT CGTTCACCAG CCTTTCGATC GGCCATAATG TCGGCGGCGC GGCCCTGAGC
AGCGGTGCCA TCCGGTATCG TTTCTATTCG CGCTGGGGCT TGAGCGCCGA AGAGATTGCG
AAAGTCATTC TCTTTTGTGG GGTCACAGTG GGCCTCGGGC TTATCGCATT GGCCGGGCTT
TGCTTTGTGG CGGTGCCGGC GGACGCCGCG CGGCTTACCG GGTTGTCCAC GAGCGGCGCA
TTTCTGCTCG GCGCTGCCTG CATCGCAACA GCGGCCAGCT ATGTACTGCT TGCGTGTTTG
TTGCGCGGTT CGGTCCGCAT CTTCCGCTGG AGCTTCGAAA TGCCCTCGGT GAAGATCGCC
ACCTTGCAGG TGATCGTCGG TGTGGCCAAC TTCCTCTGCG TCAGCGCATC CCTGCATCAG
CTGCTCAGCG CTTTTGAAGA GGTGAGTTTC ATCGACACGG CAATGGCCTA TGTCGGTGCC
GGGGTGACTG CGATCGTCAG TCACGTTCCC GGTGGAATCG GCGTCCTGGA AGCGACGATT
GCATTTCTGC TCGGCAGTTC GGCGAGTCTG GGCGCTCTCA TCGCCTTTCG GGCGATCTAT
TTCTTCCTGC CGCTGCCGCT GGGCTTGATA TCGCTGTCCG TTGCGGAGCT CGCTGCCCGT
CGCGACGACG ATAAGAGCCT CGCGAGCAAG GCGAAAAGCT GA
 
Protein sequence
MSRKILARLF IAAGIAVAGW LIYRTLSQHS FNEIVGSIMR IPGRDLFAGI GFVFLSYFCL 
TLFDTLAIRY VGRKLPYPQI AIASFTSLSI GHNVGGAALS SGAIRYRFYS RWGLSAEEIA
KVILFCGVTV GLGLIALAGL CFVAVPADAA RLTGLSTSGA FLLGAACIAT AASYVLLACL
LRGSVRIFRW SFEMPSVKIA TLQVIVGVAN FLCVSASLHQ LLSAFEEVSF IDTAMAYVGA
GVTAIVSHVP GGIGVLEATI AFLLGSSASL GALIAFRAIY FFLPLPLGLI SLSVAELAAR
RDDDKSLASK AKS