Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4036 |
Symbol | |
ID | 5318336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 497461 |
End bp | 498672 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775844 |
Product | hydroxyglutarate oxidase |
Protein accession | YP_001312777 |
Protein GI | 150376181 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.534482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTACGACT ATTGCATCAT AGGAGGCGGC ATCGTCGGCC TGTCGACGGC CATGGCGCTG CAGGACAGAG TGCCCGGCTC CAGGATCTTG CTCTTGGAAA AGGAGCCGGA GCTTGCGCGT CATCAGACGG GCCATAACAG CGGCGTGATC CATGCCGGGA TTTATTATGC GCCGGGATCC CTGAAAGCGA CGCTGTGCCG CGAGGGAGCG GAGGCGACAA AGGCGTTCTG CACCGAAAAC GGTATTCCTT TCGAAACCTG CGGCAAACTG CTGGTGGCGA CGAACGATGC CGAGATTGAA GGAATGGAGA GCCTCGAGGA TAGGGCGCGC CGGAACGGCA TCGAATACAG CCGCCTGTCG ATGTCGCAAT TGCGATCCGA CGAGCCGAAT ATCGCCGGCC TCGGTGCGCT CCTCGTCCAT GCGACCGGGA TTGTCGACTA TTCGGCGGTC TGCCGGGCAA TGGCAGCGCG TATCGAAGCC CGGGGCGGCG AAATCAGGCG CGGGGCCGAG GTCTCCGCCA TCGTGGAGGA GGCAGGCAGT GTGAGGGTTG CAAGTGCCTC CGGCCGCTTC GACGCGCGCA AGCTGATCGC CTGCGCAGGC CTCCAGTCCG ACCGTATAGC TCTGATGGCT GGCCTGACGA TCCACCACCG GATCGTTCCG TTCCGGGGGG AATATTATGT GCTTCCGTCG TCCAAGGCGG CTCTGACCCG GCGCCTCATC TATCCCATTC CAGACCCGGG CCTGCCCTTC CTCGGCATTC ATCTCACCCG GACGATCGAA GGAGGGATGA CGGTCGGGCC CAATGCCGTG CTCGGCTTTG CGCGCGAAGG TTATCCGAAG GGCAGCTTCG CTCTTGCCGA TGTGGCGGAC ATGGCGGCTT TCCCCGGCTT CTGGAAAATG GCAGCCAGGA ACTGGCGTTC GGCAATCCGT GAATTTGCCA ACTCTGCCTC TCGATACCGC TATCTGCAGG AGTGCCGGAA ATACTGTCCG TCGCTAACGA TCGCCGACCT TAGCCGTGCA CAATCTGGCA TCCGCGCGCA GGCTGTCACG GCCGACGGCA GCCTCGTCCA TGATTTCCTC TTCGAAGAGA CCGAACGGAT GCTTCACGTC TGCAACGCGC CATCTCCGGC TGCAACGTCT GCGATTCCGA TCGGCCGGAT GATCGTGGAC CGGCTGCTGG AGGGGGCCGC GCGCGCAACT GAAACGGCGT AG
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Protein sequence | MYDYCIIGGG IVGLSTAMAL QDRVPGSRIL LLEKEPELAR HQTGHNSGVI HAGIYYAPGS LKATLCREGA EATKAFCTEN GIPFETCGKL LVATNDAEIE GMESLEDRAR RNGIEYSRLS MSQLRSDEPN IAGLGALLVH ATGIVDYSAV CRAMAARIEA RGGEIRRGAE VSAIVEEAGS VRVASASGRF DARKLIACAG LQSDRIALMA GLTIHHRIVP FRGEYYVLPS SKAALTRRLI YPIPDPGLPF LGIHLTRTIE GGMTVGPNAV LGFAREGYPK GSFALADVAD MAAFPGFWKM AARNWRSAIR EFANSASRYR YLQECRKYCP SLTIADLSRA QSGIRAQAVT ADGSLVHDFL FEETERMLHV CNAPSPAATS AIPIGRMIVD RLLEGAARAT ETA
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