| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4035 |
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| Symbol | |
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| ID | 5318335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 495427 |
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| End bp | 497301 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775843 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001312776 |
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| Protein GI | 150376180 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCAC ATTCCGAACA TATCCGCGAA ATTGAGCGCG TTGGCCGTGG CCTTCCGGTC
AGCCGCGACG AAACGGTCGT GAAATCCTGG ATGCGCTGCC TCGAGCATCA CCGGCTCGAC
CCGGCCCAGA GTTGCGAAGC CTATATCGTG CCTGAAACCC GGCTCAAGGA ACACCGGCAG
CAATCGGAGG ACCTGATCGG CATCGCTCGC TCGGGGCTGG AGCACCTGTT CCGCCAGGTT
GCCGGGCAGA ACTACGTGCT GCTTCTCTCC GACCGGGAAG GCGTGACCGT GGAGTTCCTT
GGAGACCCTC TCTTCAACAA CAGCTTGCGA AAGGCCGGGC TTTATCTCGG CTCGGAGTGG
TCCGAATGGC GCGCCGGTAC CTGTGCGGTC GGCGCATGCC TGGAAACGGG AGAGGCGCTG
ACGATCCATC AGACCGACCA TTTCGACAAT ACCCACACCC CGCTCTCCTG CACGGCGGCA
CCGATTTATG ACAACAAGGG CGAACTCTCC GCGGTGCTGG ATATCTCGCT GCTGAGTTCG
CCGATCCTCA AGGCCAGCCA GAACCTCGCG CTGCATCTGG TGACCGCCAC CGTGAGACGC
ATAGAGCTTG CCAACCTCAT GGCGCAGGCG CGAAACCAGT GGGTGCTGCG GTTCTCGCGC
TCACCCGAAT TTCTCGATGT CGATCCGGAG GCGGCCATCT CGATCGACGG CCTCGGCCGG
ATCGCCGGAA TGACGCATGG GGGAGCCAAA ATACTCGCAC GCTCGACCGG GCTGGACTGG
CGCGATCCCC GGAAACTGAT CGGCGAGCCG GTGTCACGTT TCTTCGATAT CGAGGTCGAC
GATCTTTCCG ACCTCACCCG GCGCCGCCCG ACCCAGGAGC GCCTCGTCTT CGCCCGCGAC
GGAAATGCGC TCTTCGCCCA TGCGATCGAG CCGCATTCGA CCGTACGTGC GCCAGTCGTC
TCGCGCGAGC AGATTCCGCC GGCCTTGCGG CGGCTCGGCG GCGACGCGCC GGTGATCGCC
GCGCTGCAGG CAAGGGCCGC GAAGCTCGCG CGTACCGGGC TGCCGATCCT CGTTCAGGGA
GAGACGGGGA CCGGCAAAGA GCATCTTGCG CGCGCTATCC ACGAGGGCAG CGGTCTGAAG
GGGCAGTTCG TCGCGATCAA CTGCGCGGCG ATCCCCGAGC AATTGATCGA GAGCGAGCTT
TTCGGCTACC TGCCGGGCGC CTTTACCGGC GCTTCGGCGA AGGGGCGCAA GGGCCTGATC
GAGCAGGCGG ACGGAGGAAC GCTCTTCCTA GACGAGATAG GCGACATGCC GCTTGCCCTG
CAAAGCAGGC TGTTGCGCGT ACTTGCCGAG GGCGAGGTCC TGCCGGTCGG CGGCACCGTG
CCGCGAAAGG TCCGGATCCG GGTCGTGTCG GCATCGCACC GGCCACTGCA GACGCTTGTC
GCGCAAGGGG CGTTCCGCGA GGATCTCTAT TACCGGCTCA ATGCCGCGAC CCTCTCGATT
CCGGCGCTCA GGGACCGGCC GGACTTTGAC TGGATACTCG AACAGCTGCT GAAGCGGCAC
GGCGACGGTG AGTTGATATT GTCGGAGGCC GCGCTCGCGG CGCTCAAGGC GCATGATTGG
CCGGGAAACA TCCGCGAACT CGACAATGTC GTCGCCGTGG CTGCAGCGCT CGCCGAGAAC
GGCGTCGTGG AGATCGGCGA CCTGCCGGAC CACCTCCTGG TGAATGCGGA CACCGTCGGC
GGAAGCGAGG CGGGGGCGGC CTTGAGCCTT ATGCTCGCCA CTTGCGACTG GAATATTTCC
GAGACCGCCC GCCGGCTGGG GCTCGATCGC TCGACGGTGC ACCGGCAGAT CAAGCGCTAC
AGCCTCAAGC GCTGA
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| Protein sequence | MFSHSEHIRE IERVGRGLPV SRDETVVKSW MRCLEHHRLD PAQSCEAYIV PETRLKEHRQ
QSEDLIGIAR SGLEHLFRQV AGQNYVLLLS DREGVTVEFL GDPLFNNSLR KAGLYLGSEW
SEWRAGTCAV GACLETGEAL TIHQTDHFDN THTPLSCTAA PIYDNKGELS AVLDISLLSS
PILKASQNLA LHLVTATVRR IELANLMAQA RNQWVLRFSR SPEFLDVDPE AAISIDGLGR
IAGMTHGGAK ILARSTGLDW RDPRKLIGEP VSRFFDIEVD DLSDLTRRRP TQERLVFARD
GNALFAHAIE PHSTVRAPVV SREQIPPALR RLGGDAPVIA ALQARAAKLA RTGLPILVQG
ETGTGKEHLA RAIHEGSGLK GQFVAINCAA IPEQLIESEL FGYLPGAFTG ASAKGRKGLI
EQADGGTLFL DEIGDMPLAL QSRLLRVLAE GEVLPVGGTV PRKVRIRVVS ASHRPLQTLV
AQGAFREDLY YRLNAATLSI PALRDRPDFD WILEQLLKRH GDGELILSEA ALAALKAHDW
PGNIRELDNV VAVAAALAEN GVVEIGDLPD HLLVNADTVG GSEAGAALSL MLATCDWNIS
ETARRLGLDR STVHRQIKRY SLKR
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