Gene Smed_4033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4033 
Symbol 
ID5318333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp492310 
End bp494112 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content61% 
IMG OID640775841 
Productputative monooxygenase protein 
Protein accessionYP_001312774 
Protein GI150376178 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAG AAAGTCCCGG CACCCGCATC GACATTGTGC TCGCCAAACT CGGAAGAGCC 
CTCGAACGTG GCGACATCGA TGCCGCCGTC AACCTGTTCC AGGCCGATTG CTACTGGCGC
GATCTGGTTG CCTTCACCTG GAATCTCAAA ACCATGGAGG GGCAGGACCA GATCCGCGAT
ATGCTGACGA GCCAGCTTGC CGCGATCAAG CCGGCGCGGC TGCGCCAGGA CGAGATGGAA
CGGCCTGGTG ACGCAGACGG TGTCACCGAA GGATGGTTCG AATTCGAAAC GGAGGTGGCG
CGCGGCCACG GCCATATCCG CCTCAAGAAC GGCCTGATCT GGACGCTTCT GACGACGATG
ACGGAGCTTA AAGGACACGA GGAGCCAAGG GGAGCCAGAC GTCCGCTCGG CGCCGAGCAC
GGCCATGACC CGAGCCGCAA GACATGGAAG GAAAAGCGCG AAACCGAAGC GGCCGAACTC
GGTTATACAA GCCAACCCTA CGTCGTCATC ATCGGCGGAG GTCAGGGCGG AATAGCACTC
GGCGCGCGCC TCAGGCAGCT CGGCGTTCCG GCCATCATTA TCGAGAAGAA CGAGCGGCCC
GGCGACAGCT GGCGGAAGCG CTACAAGTCG CTCTGCCTGC ACGATCCGGT CTGGTACGAC
CATCTCCCCT ATATCCCCTT CCCGGAGAAC TGGCCGGTAT TCGCCCCGAA AGACAAGATC
GGCGACTGGC TGGAGATGTA TACCAAAGTG ATGGAACTCA ATTACTGGAG TTCGACCACC
TGCAAATCAG CACGGTATGA CGATGTAACG AAGGAATGGA CGGTCGTCGT CGAGCGCGAT
GGGGAGGAGG TCGTCCTCCG GCCGAAGCAG CTCGTTCTGG CGACCGGCAT GTCGGGCAAG
CCGAACGTCC CGAAGCTGAG GGGCCAGGAT ATCTTCAAGG GCGAGCAGCA GCATTCCTCT
CAGCATCCCG GTCCCGATGC ATATCGTGAG AAGAGGGTCG TCGTCATCGG CTCCAACAAT
TCCGCGCACG ATATCTGCGC CGCGCTCTGG GAAGGGGGCG CGGATGTGAC GATGGTGCAG
CGATCGTCGA CGCACATCGT GCGGTCGGAT ACGCTGATGG AGATCGGGCT TGGAGACCTT
TATTCCGAGC GGGCGCTTGC CGCCGGCATG ACGACGCGCA AGGCTGATCT GATCTTTGCT
TCGCTGCCCT ACCGGATCAT GCACGAGTTC CAGATCCCGC TATACGAGAA GATGCGCGAG
CGGGACGCCA AGTTCTATGC CGATCTCGAA AAGGCCGGCT TCATGCTCGA CTGGGGCGCG
GACGGATCCG GCCTTTTCAT GAAGTATCTG CGTCGCGGAT CCGGCTACTA TATCGACGTC
GGCGCCTGCG ATCTCGTGAT CGACGGCAGC ATCAAGCTGA AATCCGGTTC TGACGTCAGC
CATCTGACGG AGGATTCCGT GGTGCTCAAG GACGGCACAG TGCTTCCGGC CGATCTCGTC
GTCTATGCTA CAGGCTACGG CTCGATGAAT GGCTGGGCAG CCGACCTCAT CTCCAGGGAA
GTCGCGGACA AGGTCGGCAA GGTCTGGGGC CTCGGCTCCG ATACGCCGAA GGACCCGGGC
CCCTGGGAGG GCGAGCAGCG AAACATGTGG AAGCCGACGC AGCAGGAGGC GCTCTGGTTC
CACGGCGGAA ACCTGCATCA GTCGCGGCAT TATTCGCAAT ATCTGTCGCT GCAGTTGAAA
GCGCGCTGCG AGGGCATATC GACACCCGTC TATGGTCTCC AGGAACGCCA TCACCTCGCC
TGA
 
Protein sequence
MLEESPGTRI DIVLAKLGRA LERGDIDAAV NLFQADCYWR DLVAFTWNLK TMEGQDQIRD 
MLTSQLAAIK PARLRQDEME RPGDADGVTE GWFEFETEVA RGHGHIRLKN GLIWTLLTTM
TELKGHEEPR GARRPLGAEH GHDPSRKTWK EKRETEAAEL GYTSQPYVVI IGGGQGGIAL
GARLRQLGVP AIIIEKNERP GDSWRKRYKS LCLHDPVWYD HLPYIPFPEN WPVFAPKDKI
GDWLEMYTKV MELNYWSSTT CKSARYDDVT KEWTVVVERD GEEVVLRPKQ LVLATGMSGK
PNVPKLRGQD IFKGEQQHSS QHPGPDAYRE KRVVVIGSNN SAHDICAALW EGGADVTMVQ
RSSTHIVRSD TLMEIGLGDL YSERALAAGM TTRKADLIFA SLPYRIMHEF QIPLYEKMRE
RDAKFYADLE KAGFMLDWGA DGSGLFMKYL RRGSGYYIDV GACDLVIDGS IKLKSGSDVS
HLTEDSVVLK DGTVLPADLV VYATGYGSMN GWAADLISRE VADKVGKVWG LGSDTPKDPG
PWEGEQRNMW KPTQQEALWF HGGNLHQSRH YSQYLSLQLK ARCEGISTPV YGLQERHHLA