Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4031 |
Symbol | |
ID | 5318331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 490674 |
End bp | 491405 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775839 |
Product | GntR domain-containing protein |
Protein accession | YP_001312772 |
Protein GI | 150376176 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCGAGA AGCCGCTCAT TCTCGAAAGC CTAGCGGAAG CCCGCCCTTC GAGCTATGCC GATCAGGTCT ATGGGCGCAT CCTGCACGAC ATATTGAATG GAGTTTTTCA ACCGGGCGCG CGGCTGCCGA CCGAGAACGA GTTGGCCGAA CGTTTCGGCG TTTCGCGGCC GGTCGTCCGG GAAGCACTGG CGCGTCTGAG AGTCGACGGC CTTGTTGAAG CGCGGCGCGG CAGCGGCACC TATGTCCTCA GCCGGCCTTC GCAAACTCTT CCGGAACTCG CCGACCTGGA GGATATCTCG CGCTTCCTTC GATATCAGGA GCTCCGCTTC CATGTGGAAG GCCAGGCGGC CGCACTGGCT GCGGAGCGGC GCACGGAAAA GCAGCTTGCC GCCATCGTCG AAGCCCATGA AACCTTCGCC CATGAGGTCG GCAGAGGGGC TTTCCTGCCT GAAAGCGACA GGCGTTTCCA TCTTGCGATC TGCGAAGCAA CCGGAAACGA ATTCTTCGCC AAGGCGCTGG AGGGGCCGGA GGTCTCGCTG ACGAGTTTCA TGAATGTCTC GCTGGCGCTC ACCCGTTCCG GCTCGCAGGC ACGCGCCCGC CGGGTCATCG CCGAACATGC CGAGATTGTC GAAGCGATCC GCACGAAAGA TGCCGCATGG GCGCGTGTGG CGATGGAGAC GCATATCATC AAAGCGCGCC GACGGATGAC GGACGGAACA ATCGACTCCT GA
|
Protein sequence | MPEKPLILES LAEARPSSYA DQVYGRILHD ILNGVFQPGA RLPTENELAE RFGVSRPVVR EALARLRVDG LVEARRGSGT YVLSRPSQTL PELADLEDIS RFLRYQELRF HVEGQAAALA AERRTEKQLA AIVEAHETFA HEVGRGAFLP ESDRRFHLAI CEATGNEFFA KALEGPEVSL TSFMNVSLAL TRSGSQARAR RVIAEHAEIV EAIRTKDAAW ARVAMETHII KARRRMTDGT IDS
|
| |