| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4029 |
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| Symbol | |
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| ID | 5318329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 488012 |
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| End bp | 489520 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640775837 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001312770 |
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| Protein GI | 150376174 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCC GCTATTGTAC CGGCGCCTTG GCGCTATTTG CAGCGACGCT GCTCGCTGGC
GCCGCCATCG CAGCCGAAGG GGAAGTGAAG ATCGTATTGC CGGAGCAGCC GGCCAATCTC
GATCCCTGTC GCTCCATCCG GTCGGATATC GGCCGCATCA TCAATTCCAA CATCACCGAG
ACCCTGACCG TCATCGATAC GGAGAAAGGC ACCGTTGGCC CCTGGCTCGC GGAAAAATGG
GAGCAGGTGG ACGATCTTAC CTGGCGCGTG CATCTCAAGA GCGGCGTCAA GTTCCAGGAT
GGCGTGGAGT TCAATGCCGA AGCGGTGGTC AAGTCCATCA ATCGCCTGAT GAATCCGAAC
ATCACCTGCG ACAGCCGCTC CAAATTCGGC GACGTCAAGC TGACGCCGAA GGCGGTCGAC
GCGCAGACGG TGGAGATTTC CTCCGACAGC CCGGTGCCGA TCATGCCGAC ACTGCTCGGC
ACCGTCCAGA TCGTCTCGCC GAACATGCCC TTCGACAAGG AAAGCAACGA TCCCGTCGGC
ACGGGCCCCT ATGTGGTCGA AAGCAAGTCC AATGAACAGA TCGTGCTGAA GCGTCACGAT
GCCTACTGGG GTGCCAAGCC GGACGTCACG CGTGCAACCT ATGTCTGGCG CAGCGAGTCG
GCTATCCGCG CGGCCATGGT CGAATCCGGT GAAGCGGATA TGACTCCGTC CATCGCGGTA
CAGGACGCGA CCAATGCAGA GTCGGACTTC GCCTATCTGA ATTCCGAGAC GACACGCATG
CGGATCGATG CGCAAATCCC ACCGCTCGAC GACGTTCGTA TCCGCAAGGC CCTGAACATG
GCCATCGACT GGGACGGGAT GGGCGAAGCG CTGTTCGGCA AGGATGTGCT CAGGGCGTCG
CAAATGGTCG TTCCGGGCGT GCGCGGACAC AATCCCGATA TCAAGCCATG GACCTACAAT
CCCGAAGAGG CGATGAAGCT GGTCGAGCAG GCCAAGGCCG ACGGCGCTCC GGTCGACAAG
GAGATCGTGC TGATCGGGCG CAACGGCTTT TTCCCGAATT CGGCTGAAAG CCTGGAAGCG
ATCCGGTCCA TGTGGCAGGA AATCGGGCTC AACGTTTCGA TACGCCAGCT CGAGGCGGCA
GACTGGGTAC GCTATCTCGA CAAGCCTTTT CCCGAAGGGC GCGGCCCGAC CCTGTTCCAG
CAGCAGCACG ACAACAATAC CGGCGATGCC GGGTTCACCG CGCCGGTCAT GTATCTGAGC
GAGGGGCAAT ATTCGACGAT CGCAGACAAG GATCTCGATG CCGTCCTCAA GAAAGCCATG
GCTGCGACCG GCGACGAGCG CGAAAAGCTC TTCCAGGAGG TCTTCGCAAA GGTGCACGAC
GAGATCGTTG CAGACGTGCC GATGTACCAC ATGATCGGAT ATGTCCGCGT CGGCTCGCGC
CTCGACTGGA AGCCGGATCT CAAAACGAAC AGCGAGATCG CGCTCTCCGA GATTCACTTC
AAGGACTGA
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| Protein sequence | MIIRYCTGAL ALFAATLLAG AAIAAEGEVK IVLPEQPANL DPCRSIRSDI GRIINSNITE
TLTVIDTEKG TVGPWLAEKW EQVDDLTWRV HLKSGVKFQD GVEFNAEAVV KSINRLMNPN
ITCDSRSKFG DVKLTPKAVD AQTVEISSDS PVPIMPTLLG TVQIVSPNMP FDKESNDPVG
TGPYVVESKS NEQIVLKRHD AYWGAKPDVT RATYVWRSES AIRAAMVESG EADMTPSIAV
QDATNAESDF AYLNSETTRM RIDAQIPPLD DVRIRKALNM AIDWDGMGEA LFGKDVLRAS
QMVVPGVRGH NPDIKPWTYN PEEAMKLVEQ AKADGAPVDK EIVLIGRNGF FPNSAESLEA
IRSMWQEIGL NVSIRQLEAA DWVRYLDKPF PEGRGPTLFQ QQHDNNTGDA GFTAPVMYLS
EGQYSTIADK DLDAVLKKAM AATGDEREKL FQEVFAKVHD EIVADVPMYH MIGYVRVGSR
LDWKPDLKTN SEIALSEIHF KD
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