Gene Smed_4025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4025 
Symbol 
ID5318325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp483569 
End bp484393 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID640775833 
Producthypothetical protein 
Protein accessionYP_001312766 
Protein GI150376170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.651718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.814245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCGA ATTCTCTGGT TGCGGCGATG GATAGCGTGA TCGTGCGCTT CGTGGCTGGA 
GAGGTTCACC CGATCGGGAT CGTCTTCTTC CGCAATCTCG CCAGTCTGGG CGCGCTCTAT
CTGCTCATTC GCTCGCGGGG TTTCGTCGTA GAGCGGACGA TGTCGTTCCA CGTCCATGCG
ATCAGGGCCA TCATCAAGCT TCTGGCCCTG CTCGCGGCCT TCATCGCGGT CACGCAGATC
CCTCTGGCCT CCGCGACTGC GATCGCCTTC ACCATGCCTC TTTTCGTCGC CTTCGGCTCG
GTGCTTTTTC TGGGCGAGCG GTTTTCCTCC GGCCGGGCCC TCAGCCTCGC CGGCGGCTTC
GCGGGCATCC TGATCGTCGT CCGGCCGGGT GCGGAAACCT TCGACACAGG CGCTGCCTGG
GCACTCGCTT CCGCGGTCGG TCTTGCCATC GTCGCGCTCC TGATGAAGGT TTCGGCCGGG
CGCGAGGACC CGGTCAGCAT AGCCTGGCTG AATCTCCTGG TGACGGTTCC CGTCGCCTTC
CTCCTCGCTT TGCCCTTTTG GCAGACGCCT TCGCTGTTCA GCCTTTTCCT GATGACGCTG
CAGGGTATCG GCGGTCTTTT CGCGCAGCTT TCCTTCGCAC GGGCAATGAA GCTGGCGGAT
GCATCCCTGC TGGTTACCGT CGATTTCATA CGGCTGCCGC TCGCCCTCGT CATCGGCCTC
CTGTTCTTCG GCGAGCCGAT CCGGCTCGAT GTGGTGATCG GCGGAGCGAT CATCCTCGGA
GCGATCACAC TTCTCTTTCA CCGAGAGGGA AGGGGCACGA AGTAG
 
Protein sequence
MGANSLVAAM DSVIVRFVAG EVHPIGIVFF RNLASLGALY LLIRSRGFVV ERTMSFHVHA 
IRAIIKLLAL LAAFIAVTQI PLASATAIAF TMPLFVAFGS VLFLGERFSS GRALSLAGGF
AGILIVVRPG AETFDTGAAW ALASAVGLAI VALLMKVSAG REDPVSIAWL NLLVTVPVAF
LLALPFWQTP SLFSLFLMTL QGIGGLFAQL SFARAMKLAD ASLLVTVDFI RLPLALVIGL
LFFGEPIRLD VVIGGAIILG AITLLFHREG RGTK