Gene Smed_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4023 
Symbol 
ID5318323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp481779 
End bp482504 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID640775831 
Producthypothetical protein 
Protein accessionYP_001312764 
Protein GI150376168 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTT ATAGTCTGTC CAAAGAGGCC CGCAGGAAAT TCGAAGGCGT AAGCTGCGCC 
ACTTTGTGCA CCGCCCTCTT CAAGCGGGGC CTGCGCAACC AGTTCATCCA GGACGTTCGT
CCGGTCTCGC CGAAGGCCAC GAACATGGTC GGCCAGGCCT TCACACTCAG ATACATTCCT
GCTCGCGAGG ACCTGAACCA GCTTTCCGTG TTTCAGAACC CCGACCACCC CCAGCGCGCA
GCCGTGGAGC AGTGCCCTCC CGGCTTCGTC ATGGTGATGG ACAGCCGCAA GGACCCGCGA
GCGGCTTCCG CGGGCTCGAT CCTGGTTTCC CGACTGATGG TGCGCGGAGT GGCGGGCGTG
GTCACCGATG GTGGTTTCCG GGACAGCCCG GAAATTGGCG AGCTCGACAT CCCGGCCTAT
CACTGCCGCC CATCCGCGCC GACGAACCTG ACATTGCACC AGGCGCTCGA CATCAACATC
CCGATCGGCT GCGGCGACGT CGCCGTCTGG CCAGGAGACG TCGTCATAGG CGATCGCGAA
GGCGTGGTCG TCGTCCCCGC GCATCTGGCC GAAGAGATCG CCGACGAAGC CGTCGAGATG
ACGGCCTTCG AGGACTTCGT CACCGAAGAA GTCCTGAAGG GGCGCTCCAT CATCGGCCTG
TACCCTGCGA CGCAGGAACG GACAAAGGCC GATTTTGCAG CCTGGCGGCA GAGCAAGGGG
CGCTAG
 
Protein sequence
MSVYSLSKEA RRKFEGVSCA TLCTALFKRG LRNQFIQDVR PVSPKATNMV GQAFTLRYIP 
AREDLNQLSV FQNPDHPQRA AVEQCPPGFV MVMDSRKDPR AASAGSILVS RLMVRGVAGV
VTDGGFRDSP EIGELDIPAY HCRPSAPTNL TLHQALDINI PIGCGDVAVW PGDVVIGDRE
GVVVVPAHLA EEIADEAVEM TAFEDFVTEE VLKGRSIIGL YPATQERTKA DFAAWRQSKG
R