| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4021 |
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| Symbol | |
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| ID | 5318830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 477697 |
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| End bp | 479901 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775829 |
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| Product | Amylo-alpha-16-glucosidase |
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| Protein accession | YP_001312762 |
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| Protein GI | 150376166 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACCA ATCTCTCCGG AGCGGCGGCC GAAGCCGCTC CCGATGTGAC ATCTGCGGAC
GAACTGGGGC CGGCAGCGGT CTCGCGTTAC GAGCGAAGCT CCAGATCCCT GAAACACGGC
GATACCTTCG CCGTGTTCGA CCATAACGGC GACGCGTTTT CCTCTCCTTC CAATCCGGAG
GGCATCTTCC ATCGCGATAC CCGCCATCTC TCTCAATTCG TGCTGAGGCT GAACGGCGCC
AGATCGCTGC TGCTGAGTTC CACGCTCCGC GACGACAATG CCACGCTCGA CTGCGATCTC
ACCAATCCGG CTCTCGTGCT CGATACCGGT GGCGAGGTTT TGAAGCATGA CCTCATTCAT
GTGCGGCGCA CCCGCTTTCT CTGGCAGGAG GCCTGCTACG AACGACTGGT GCTGCGCAAC
TTCGATGAGG CCCCGAGAAG GCTGCAGGTC GAGCTGTCCT TTGCCGCCGA CTTCGCCGAC
CTCTTCGAAG TGCGCGGCAC CCCAAGGCGG CGGCGCGGCA CCCATCATAA CGCGCTCGTC
GGCAATGGCC GGGTGGTCCT TGCCTATGAC GGCCTCGACG GCCAGACCCG CAGCACGACT
CTTCGCTTCG ATCCGGAGCC GCAGAGGCTT ACAGGGCAGG AGGCAAGCTT TGTCGTCGAG
CTCGCTCCGA ACCAGGCGCA ATCGATCTTC ATCGAGATCG TTTGCAACAG CCTTGAGGAC
AATCCGCACC CCCCGGCCTT CAACTTCTTT CTCGCGCTGC GCGACGCCCG CAGGGCGCTA
CGCTACTCCG CCTCGCGCGC GGCCGCGGTC GTGACCTCCA ATGCGGTGTT CAACGAGGCC
GTCAGACGCA GCGTCGCCGA TCTCTATATG CTGCTTACGG AGACGCCCGA GGGTCCCTAC
CCCTATGCCG GCATTCCCTG GTTCAGCACC GTCTTCGGCC GGGATGCGCT CATCACCGCG
CTTGAGACCC TGTGGCTGGA CCCGGCGATC GCGAAGGGCG TGCTCAGACA TCTCGCAGCA
AACCAGGCGA CCGATTTCGA CCCAGTTGCC GATGCGGAGC CGGGCAAGAT CCTGCATGAG
ATGCGTTATG GCGAAATGGC GGAACTCGGC GAAGTTCCTT TCCGGCGCTA TTATGGCAGC
GTCGATTCCA CCCCTCTCTT CATCATGCTT GCCGGCGCCT ATCTCGACCG TACCGGTGAT
ACCGACACCG TGCGGGGCCT CTGGCCGAAT ATAGTGGCCG CACTCGACTG GATCGATCGT
TTCGGCGACC GCGACGGCGA CGGCTTCGTC GAATATGGAA GCCGGACGGC GAAGGGCCTG
GTGAACCAGT GCTGGAAGGA CAGCCATGAT TCGATCTTCC ACGCCGATGG CAGACTGGCT
AAAGGGCCGG TCGCGACCGC CGAGGTGCAG GCATATATCT TCGGAGCCTG GCGGGCGGCC
GCCCGCCTGT CGCGCAAGCT CGGCCATGCA GAGGATGCGC TGAGGCTCGA GCAACGGGCC
GAAGACCTGC GCATCCGTTT CGACGCGGCC TTCTTCGACG AGGAGCTTGG CACCTATTCG
CTGGCACTCG ACGGGGACAA GAACCCCTGC CGCGTCCGTT CCTCCAATGC GGGGCATGCG
CTCTTCACCG GCATCGCACT GCCTGAGCGC GCCGGCAGGG TCGTGTCCAC GCTGATGGCC
CAGTCCTCCT TCTGCGGCTG GGGCGTGCGC ACGATCGCCG CTTCTGAGGC GCGCTACAAT
CCCATGAGCT ACCACAATGG CTCGGTCTGG CCGCATGACA ATGCTCTGAT CGCCGCAGGC
TTCGTACGCT ACGGCTTCCA GGCAGAAGCG GCCAGCATCT TCGAAGGGCT GTTCGCCGCC
TCCACCTATA TCGACCTCAG GCGCTTGCCG GAGCTCTTCT GCGGCTTTTC GCGCCAGCGC
GCCCGCGGCC CTACCTTCTA CCCGGTTTCC TGCGTGCCGC AGGCCTGGGC GGCAGCGGCA
CCCCTTTATC TGCTTCAGTC GATGATCGGC CTCGGCTTCG ACGCCGAGAA GTCGCAGGTC
ATGTTGACCG AACCCACCCT CCCGCCCTTC CTCGATGAAG TCGTGCTGAA ACGGCTGCGG
GTCGGGCCTG GGATCGTCGA CATTGCACTG AGGCGATCGC GATCCCAGGT GGTCGTGGAC
GTGCTGGAGC GGAAGGGCGG CGTGAAGGTA CTGACGACCC ATTGA
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| Protein sequence | MGTNLSGAAA EAAPDVTSAD ELGPAAVSRY ERSSRSLKHG DTFAVFDHNG DAFSSPSNPE
GIFHRDTRHL SQFVLRLNGA RSLLLSSTLR DDNATLDCDL TNPALVLDTG GEVLKHDLIH
VRRTRFLWQE ACYERLVLRN FDEAPRRLQV ELSFAADFAD LFEVRGTPRR RRGTHHNALV
GNGRVVLAYD GLDGQTRSTT LRFDPEPQRL TGQEASFVVE LAPNQAQSIF IEIVCNSLED
NPHPPAFNFF LALRDARRAL RYSASRAAAV VTSNAVFNEA VRRSVADLYM LLTETPEGPY
PYAGIPWFST VFGRDALITA LETLWLDPAI AKGVLRHLAA NQATDFDPVA DAEPGKILHE
MRYGEMAELG EVPFRRYYGS VDSTPLFIML AGAYLDRTGD TDTVRGLWPN IVAALDWIDR
FGDRDGDGFV EYGSRTAKGL VNQCWKDSHD SIFHADGRLA KGPVATAEVQ AYIFGAWRAA
ARLSRKLGHA EDALRLEQRA EDLRIRFDAA FFDEELGTYS LALDGDKNPC RVRSSNAGHA
LFTGIALPER AGRVVSTLMA QSSFCGWGVR TIAASEARYN PMSYHNGSVW PHDNALIAAG
FVRYGFQAEA ASIFEGLFAA STYIDLRRLP ELFCGFSRQR ARGPTFYPVS CVPQAWAAAA
PLYLLQSMIG LGFDAEKSQV MLTEPTLPPF LDEVVLKRLR VGPGIVDIAL RRSRSQVVVD
VLERKGGVKV LTTH
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