Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4020 |
Symbol | |
ID | 5318829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 476548 |
End bp | 477567 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775828 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001312761 |
Protein GI | 150376165 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGAAG AGCTCGTCCG GCAGGGTCAC GAGGTCACCC TCTTCGCGAG CGGCGACTCG ATGACATCGG CAAGGCTCGT CCCCTGCTCG CAAATGGCGC TGAGGTTGAA CCCCGCCATT CAGGATCCGA TTCCCTATCA CATGATGCTG CTGGAAGAAG TGCGCCGGCA GGCGCCCGCC TTCGACATCC TGCACTTCCA CATCGATCTT CTTCATTTTC CCCTTGTCCG CGACCTCGCC GGAAAGACGG TGACGACCCT GCACGGCCGG CTCGATCTGC CCGACCTCCA GCCGTTCTAC GCCGCGTTTC CGGATGTCCC CCTGGTTTCT ATCTCGCACG ATCAGCGGCG GCCGATGCCG CCGGTCAACT GGATCGCCAC TGTCCATCAC GGGCTGGCTC CGGACGTCCT TCCCTTCACC AGCCCTCCCA AGGGCGACTA CCTGGCCTTT CTTGGCCGTA TCTCGCCGGA AAAGCGGCCC GACCGTGCGA TCGAAATCGC CGCCCGGGCC GGCATGCCGT TGAAAATGGC CGCGAAGGTG GACCGGGTGG ACGAGCCCTA TTGGCTGAGT GAGATCGAGC CGCTCATCCG GCGCTATCCG AATGTCGAGT TCATCGGCGA AATCAACGAA CATCAGAAGG CCGAATTCCT TGGAAACGCG CGCGCCCTCC TCTTCCCGAT CGACTGGCCC GAACCCTTCG GTCTGGTGAT GATCGAGGCG ATGGCCTGCG GCACGCCGGT GATCGCCTTT CGCTGCGGCT CGGTGCCTGA GATCGTCGAC CACGGCGTTT CGGGTTTCAT CGTCGACAGC ACCGAGGAAG CGTTGAAGGC GGTCCACGGA CTCGACCGGG TCGATCGCCG TATGGTCCGT GCCACATTCG ACAGGCGTTT TACGGCCCAG CGCATGGCAA ACGATTATCT CGATATCTAT CGTGCTCTGG CAAGCGGCAG CCAAAGGGTC ATGCCGATCC ATGCTGCGAA CGAAAGCAAT GCCGGCCCTG GCTCTGCCCG GGTCGCCTGA
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Protein sequence | MTEELVRQGH EVTLFASGDS MTSARLVPCS QMALRLNPAI QDPIPYHMML LEEVRRQAPA FDILHFHIDL LHFPLVRDLA GKTVTTLHGR LDLPDLQPFY AAFPDVPLVS ISHDQRRPMP PVNWIATVHH GLAPDVLPFT SPPKGDYLAF LGRISPEKRP DRAIEIAARA GMPLKMAAKV DRVDEPYWLS EIEPLIRRYP NVEFIGEINE HQKAEFLGNA RALLFPIDWP EPFGLVMIEA MACGTPVIAF RCGSVPEIVD HGVSGFIVDS TEEALKAVHG LDRVDRRMVR ATFDRRFTAQ RMANDYLDIY RALASGSQRV MPIHAANESN AGPGSARVA
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