| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4007 |
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| Symbol | |
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| ID | 5318287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 462221 |
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| End bp | 463519 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775815 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001312748 |
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| Protein GI | 150376152 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACGG TTATTGGAGC CCGTCAAGGC GGCGCCCGCC GCGCACTTCT CTTGCGGGGA
TGCCGGATCG CCGGCGAAAT TGCGGCCGAG GCCGGGCGCG ACATCCTCGT TGGAGAGAAT
GGCCGCATCG CAAGGATCGG CTCCCGGCTG GACGTGGGTC CGGATGTGGC CGTCGTCGAG
GTCCGCGGTG CACTCATCTC ACCGGGATTT GTCGACGTAC ATCAGCATCT GGACAAGACC
GGCGTTCTCA GGTTCACGCC GAATCCCTCG GGAACATTGC AGGGCGCGCG GGAGGCATTC
GCCGAATATG CCCGCAAGGC GCCGGAAGAG GATGTTACGC GACGGGCTGC GCGGACCATG
GCGCGCTGCC TTGGCCGGGG CACCACGGCG ATCCGGAGCC ATATAAATGT CGACAAGGAT
GCCGGCTTCA ACGGGATCAA CGCCCTGGCC CGGCTGCGCT CTGAATGGGC CGACCGGCTC
ACGCTGCAGA TAGTCGCATT CATGACGCCG CATCCCAACC AGGATCTCGC CTGGCTGGAG
AGCAACATCG ATGCCGCCGT TGAACAGGCG GACGCGGTGG GAGGCACACC GGCCGTCGCC
GAGGACCCGA TCCGCTATCT CGACATTCTG TTTGCAGCCG CCAAGCGGCA TGGCCGGCCC
ATCGACCTGC ACCTCGACGA ACACCTGAAC CCCGAACGGC CGCTTTTCGA TGCGGTGTTC
GAACGCGTCC GCAAATTCGG CCTGCAGGGA CGGACCGTCC TCGGGCACGC CTCCGTCCTG
AGTGCACTTC CGAGGACGGA ATTCGAGCGC ATCCGCGACC GCATGATCGA CCTCGACATC
GCGGTCGTGA CCTTGCCTGC CGCCAACCTC TATTTGCAGG GCCGAAGCCA CGACATGTTA
CCGCCCCGAG GCTTGACGCG CGTCGCCGAG CTGATCCGCT CGGGCGTGGC AATCGCAACC
GCGTCGGACA ACATTCAGGA TCCGTTCGTG CCGACGGGAT CGGGCGACAT GCTCGAGATC
GCGCGCTGGA CGCTGCTCGC CGGTCATCTG CGCGGCGACG AGCTCGCCAC AGCCTATGAC
ATGATCACCA AGATTCCGGC ACGCATGATG AATTTGGGCG CTGACTACGG CATTCGCGAG
GGCGCCTGGG CGGATCTCGT CATCAGCGAT TGCGAGGATG TGAGCGCGCT CGTCAGCGCA
GGTCCGGACT GCATGCAGGT CCTTGCAAAA GGCCGGCCGA TCGCAGCACC CGCATTCCCT
GCCATGGCAG CCATATGCGC ATTGGAAAAT GTCCCCTGA
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| Protein sequence | MHTVIGARQG GARRALLLRG CRIAGEIAAE AGRDILVGEN GRIARIGSRL DVGPDVAVVE
VRGALISPGF VDVHQHLDKT GVLRFTPNPS GTLQGAREAF AEYARKAPEE DVTRRAARTM
ARCLGRGTTA IRSHINVDKD AGFNGINALA RLRSEWADRL TLQIVAFMTP HPNQDLAWLE
SNIDAAVEQA DAVGGTPAVA EDPIRYLDIL FAAAKRHGRP IDLHLDEHLN PERPLFDAVF
ERVRKFGLQG RTVLGHASVL SALPRTEFER IRDRMIDLDI AVVTLPAANL YLQGRSHDML
PPRGLTRVAE LIRSGVAIAT ASDNIQDPFV PTGSGDMLEI ARWTLLAGHL RGDELATAYD
MITKIPARMM NLGADYGIRE GAWADLVISD CEDVSALVSA GPDCMQVLAK GRPIAAPAFP
AMAAICALEN VP
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