Gene Smed_4004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4004 
Symbol 
ID5318284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp459603 
End bp460088 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content65% 
IMG OID640775812 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001312745 
Protein GI150376149 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.213376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC TTGTTTCGAT GACGGTCAAC GGCGAGCCGT GCGAACTCTC CGTCGCCCTG 
AACCGCACGC TGCTGGACGC GCTGCGCAAC GAAGGCAGCC TCACCGGAAC CAAGAAAGGC
TGCGACGTCG GTGACTGCGG TGCCTGCACG GTCATCATGG ACGGTCGCCC GGTCAATGCC
TGCCTGGTGC TCGCCGCCGA AGCCGAGGGG GCGGCGATCG AGACGATCGA GGGCCTGCAG
CCGGCCTATG ACAAGCCGCA CGCCCTGCAG CAGAAGTTCA TGGAATTCGG CGGGGCGCAG
TGCGGCTTCT GCACGCCGGG CATCATCATG ATGGCCAAGG CGCTGCTGGA CGAAAATCCG
GACCCGAGCG AGGACGAGAT CCGCTTCGCG CTTGCCGGCA ATATCTGCCG CTGCACCGGC
TACACCAAGA TCATCGATGC CGTCAGGGCC ACGGCGGAGG AATTGAGAAG GGCGGGAACG
CTATGA
 
Protein sequence
MNRLVSMTVN GEPCELSVAL NRTLLDALRN EGSLTGTKKG CDVGDCGACT VIMDGRPVNA 
CLVLAAEAEG AAIETIEGLQ PAYDKPHALQ QKFMEFGGAQ CGFCTPGIIM MAKALLDENP
DPSEDEIRFA LAGNICRCTG YTKIIDAVRA TAEELRRAGT L