| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3995 |
|---|
| Symbol | |
|---|
| ID | 5319242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 448573 |
|---|
| End bp | 449088 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640775803 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001312736 |
|---|
| Protein GI | 150376140 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4329] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.77817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTGA AAGGATGGCC GGCATTGGAC AACACCCGAC AAGGCAACGG AGAATTCCCT
GCCGCAGCCG GAATTCTGCT CGGTCTGGGC CTTGGTGGCT TCTTCGACGG CATCGTTCTC
CATCAGGTGC TTCAGTGGCA TCACATGCTG AGCAGCGCAG GTTTTCCCCC CGACAGCCTG
GAAAACCTGA AGCTGAACAC GTTTTTCGAT GGCCTCTTTC ACGCGGCCAC ATACATCTTC
GTCGTCCTGG GCGTGGTGGT TTTGTGGCGC AGTGCGCACC GCAGGCGCCT GCATTGGTCG
GCCAGGCTGA TGGCTGGCAG CTTTCTTATG GGCTTCGGCG CCTTCAACCT GGTCGAGGGC
ATGGTCAACC ATCAGCTGCT TGGACTCCAC CATGTCAACG AGACGGTGCC GCGCGATCAG
TGGGTCTACT GGGACATCGG CTTTCTCCTC TGGGGGGCCG TGATGCTGAT TGCCGGATGG
GCTCTCTACC GGTCCGGCCG GCGGGCTTCC GGCTGA
|
|---|
| Protein sequence | MLLKGWPALD NTRQGNGEFP AAAGILLGLG LGGFFDGIVL HQVLQWHHML SSAGFPPDSL
ENLKLNTFFD GLFHAATYIF VVLGVVVLWR SAHRRRLHWS ARLMAGSFLM GFGAFNLVEG
MVNHQLLGLH HVNETVPRDQ WVYWDIGFLL WGAVMLIAGW ALYRSGRRAS G
|
|---|
| |