| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3988 |
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| Symbol | |
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| ID | 5317914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 439834 |
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| End bp | 441477 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775796 |
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| Product | ABC transporter related |
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| Protein accession | YP_001312729 |
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| Protein GI | 150376133 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.704503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC ATCTGCTCGA GGTCCGTAAT CTCTCGGTCG AATTTCACAC CGCGGCCGGC
GTGGTGCACG CCGTAAAATC GATCTCCTAT CACCTCGACA AGGGAGAGAC GCTGGCCATC
CTCGGCGAAA GCGGCTCCGG CAAGTCGGTA TCTTCCTCGG CGATCATGAA CCTCATCGAC
ATGCCGCCGG GGCGCATCAG CGGCGGCGAA ATCCTGCTCG ACGGCAGGGA CCTGCTGACG
ATGCCAGCCG AGGAGCGGCG CGAGGTCAAC GGCCGCCGGG TGGCCATGAT CTTCCAGGAT
CCGCTCAGCC ACCTCAATCC AGTCTACAGC GTCGGCTGGC AGATCGCGGA AGCCATGACC
ACCCATGGGC TCGCCGGCAG CAAGGCACGC GAGGAAGGAC TGCGGCTCCT TCGCCGCGTC
GGAATTCCCG AGCCCGAGCG GGCAATGCGC AAATATCCGC ACGAGTTCTC GGGTGGCCAG
CGCCAGCGCG TCATGATCGC AATGGCGTTG GCGCTGCGGC CGGATCTCTT GATAGCAGAC
GAACCGACCA CCGCACTCGA CGTGACCGTG CAGGCAGAAG TTCTAAAGCT TCTGAAGGAG
CTGCAGCGCG AAACAGGTAT GGCGGTGCTG ATCATCACGC ACGATCTCGG CGTCGTGGCG
GAAATCGCCG ACCGGGTGGT CGTGATGGAG AAAGGCACCC TCGTCGAGGC GGGGACCGTC
CGCGAGATCT ACAAGAACCC GCAGCATCCC TATACGCGCA AGCTCATCGC CGCCGCCCCC
GGAAAGGGCG TGATGCATGA GCCCGGCGCC CGCGCCGAGC CTCTGCTCAG CGTGCGCGAC
GTGCGCAAGA CCTACGGCTC GTTCGAAGCA CTGAAGGGCA TCTCCTTCGA CCTGATGCCC
GGCGAGACAA TGGCGGTGGT CGGGGAAAGC GGATCCGGTA AATCGACCCT GGCCCGTGCA
CTGCTTCGTC TCGACGAGCC GGACAGCGGC ACTGCCTTGT GGAAGGGACG CGACCTTTTC
GCGTTATCGC CTTCAGAGCT CTACAAGCTC CGGCGCGACC TCCAGATGGT GTTTCAGGAC
CCGACGCAGT CGCTCAATCC GCGCATGACG GTGTTTCAGC TGATCTCCGA AGCCTGGGTT
ATTCATCCGG ACATTCTGCC CAAGGCAAGA TGGCGCGAGC GCGTCGCGGA GCTCCTCGCG
CAGGTCGGTC TTTCGGCCGA ACACATGAGC CGCTATCCGC ACCAGTTTTC CGGCGGCCAG
CGCCAGCGCA TCGCCATCGC CCGGGCGCTT GCACTCGAGC CGCAGTTGAT CATCTGCGAT
GAAGCCGTCT CAGCGCTGGA CGTCTCCGTG CAGGCGCAGG TGATCGAGCT TCTCGACAAG
CTGCGGCGCG AAATGGGCAT CGCCTTCATC TTCATCGCCC ATGACCTTCC CGTCGTTCGT
GATTTCGCCG ATCACGTCAT GGTCATGCAG CAGGGAGAAA TCGTCGAGCT CGGCACCATC
CGCGAGGTCT TCGAAACGCC GCGCCAGGCC TATACGCGTG CGCTCCTGGC GGCCAGTCTC
AGTCCCGACC CCGACGCCAA AGCCGGTTGC CCTGAACCGC CGGCCGCCGA CGCCGAAATT
CTCATTCCGA AGCGGAGCCA CTGA
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| Protein sequence | MAEHLLEVRN LSVEFHTAAG VVHAVKSISY HLDKGETLAI LGESGSGKSV SSSAIMNLID
MPPGRISGGE ILLDGRDLLT MPAEERREVN GRRVAMIFQD PLSHLNPVYS VGWQIAEAMT
THGLAGSKAR EEGLRLLRRV GIPEPERAMR KYPHEFSGGQ RQRVMIAMAL ALRPDLLIAD
EPTTALDVTV QAEVLKLLKE LQRETGMAVL IITHDLGVVA EIADRVVVME KGTLVEAGTV
REIYKNPQHP YTRKLIAAAP GKGVMHEPGA RAEPLLSVRD VRKTYGSFEA LKGISFDLMP
GETMAVVGES GSGKSTLARA LLRLDEPDSG TALWKGRDLF ALSPSELYKL RRDLQMVFQD
PTQSLNPRMT VFQLISEAWV IHPDILPKAR WRERVAELLA QVGLSAEHMS RYPHQFSGGQ
RQRIAIARAL ALEPQLIICD EAVSALDVSV QAQVIELLDK LRREMGIAFI FIAHDLPVVR
DFADHVMVMQ QGEIVELGTI REVFETPRQA YTRALLAASL SPDPDAKAGC PEPPAADAEI
LIPKRSH
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