| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3986 |
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| Symbol | |
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| ID | 5317912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 437990 |
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| End bp | 438904 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775794 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001312727 |
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| Protein GI | 150376131 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAT TCATCCGCCA ACGCGCGCTC GCCAGCCTGA TCTCGCTCAT CGGCCTGATC
GTCATGGTTT TCTTTCTGTC CCGGATGACC GGCGACCCGG CGGCTCTGTT TCTACCCGTC
GAGGCGTCCG CCGAGATGAA GGACCAGTTC CGGGAACTGC ACGGGCTCAA CGATCCCATC
CTCGTCCAGT TCGCCCGGTA TGTGGGCGAC GTTGCGACCG GCGACCTGGG TCAATCCCTG
CGCAAGGCCC GCCCTGCCCT CGATGTCGTA CTCGAGGCCT TCACCTGGAC CCTCTGGCTC
GCCATCATCA CGATGACCCT TGTCACCGGT GCGGCGATCG TCGTCGGCTC GCTTGGCGCC
TTCCGCTCCG GCGGCTTCTT CGACCGGTTC TCCTCGATGA TATCGCTCGT CGGAGCGTCA
GTACCGGATT TCTGGCTGGC GATCGTCGCC ATCGTCATCT TCTCGATCAA CTTCGCGATC
CTCCCGACTT CCGGCACCGG ATCGGTCCTG CACTGGATCC TGCCGATCGC TGTTCTCTTC
GTCCGCCCCT TCGGGATCAT CGTCCAGGTG GTGCGCGGCG CAATGGTCGG CGCGCTTTCC
TCGGCCTATG TGAAGACGGC CCGCGCCAAG GGCGTGAAGT CCGGACCCAT CATCTTCATC
CACGCTCTGC GTAATGCGAT GCTGCCCGTC ATCACCGTGG TGGGCGATCA GGCAGCGAGC
CTGCTGAACG GAGCGGTCGT TGTCGAGACC ATCTTCGGCT TCCCCGGAGT GGGCAAGCTC
ATGATCGACT CCATCCTGCA ACGGGATTTC AACGTGGTGC TTGCGGCGAT CCTTGTCACG
GCCATTGCCA TCTTCCTCAT GAACGTCCTG ATCGATCTCG CCTACGCTTT GCTCGATCCG
CGCATCCGGC ACTGA
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| Protein sequence | MLRFIRQRAL ASLISLIGLI VMVFFLSRMT GDPAALFLPV EASAEMKDQF RELHGLNDPI
LVQFARYVGD VATGDLGQSL RKARPALDVV LEAFTWTLWL AIITMTLVTG AAIVVGSLGA
FRSGGFFDRF SSMISLVGAS VPDFWLAIVA IVIFSINFAI LPTSGTGSVL HWILPIAVLF
VRPFGIIVQV VRGAMVGALS SAYVKTARAK GVKSGPIIFI HALRNAMLPV ITVVGDQAAS
LLNGAVVVET IFGFPGVGKL MIDSILQRDF NVVLAAILVT AIAIFLMNVL IDLAYALLDP
RIRH
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