| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3977 |
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| Symbol | |
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| ID | 5318110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 428287 |
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| End bp | 429192 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775786 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001312719 |
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| Protein GI | 150376123 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTCA GAATGATCGC CGAAGAGAAG GTGGGTGTGT TTTTCGGGGA GCCGGAATCT
CCTTGTCTGG TGGCGCGGCC GGTTCATGCG GCGAAATTTT CAGTGACCCG TCTGCAGTGC
CGCCTGGACG GCAGGGCCAG CCGGTTGGTA AGGCTGCCGG CTGACGATGC CTATTTCCTC
ATGCTCTATC TTGATGATGC GCTTCATCGC GATGTTGCCG GCGACGGCAC AGAGTGCGAG
GTGCGGCGAT ACCGCGAGGG TTCCGTCTGT CTCGTAGACC TGACGCATGG CGCGAGCATC
CGGCTCGTGA GCGACCTCGA TTCGCTGGCC TTCTATATGC CGCGAGACCT CTTTCGCGAA
GTATCCAAAG TCGCGAATGC CCCCCGGGCA ACCGGGCTCA GGTGCCGAAG GGGCGAGGAC
GATGACGTCA TGCGAAATCT GGGCACCGCC CTGCTTCCCT TCTTCGACGA ACAGGGCCGC
GGCCAAAATG CAGTCCTCCA GCATATTGCA ATCGCAGTCT GTGCGCACCT GCTTCACTCC
TATACCGATC CCGGCGAGGC TCGCGGCGGC GTTGCGGGCC TGTCTGTATG GCAGGAAAAG
GCCGCCAAGG ACTTCATGAT CGAGCATTTT GCCGAAGACT TCTCGTTTGC GGCCGCGGCC
GCCGCGGCCG GTCTGTCCAA GCGGGACTTC ATCAATGGCT TCAGCGACGT TGCCGGCTTG
ACCCCGTCCC AGTGGCTGAT GCGTCACAGG ATCGTCCGGG CGAAACAATA CCTGACCTCA
CGCGCCTTGA CGTTGAGCGA GGTGGCGAAG CGCTGCGGCT TCAGCGACGT GGATCAATTC
GACCGTGCCT TTCGCAGAGC CACGGGAACC TCTCCTTCCG ATTGGCGCGG ACGATGGCTC
AACTAA
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| Protein sequence | MSLRMIAEEK VGVFFGEPES PCLVARPVHA AKFSVTRLQC RLDGRASRLV RLPADDAYFL
MLYLDDALHR DVAGDGTECE VRRYREGSVC LVDLTHGASI RLVSDLDSLA FYMPRDLFRE
VSKVANAPRA TGLRCRRGED DDVMRNLGTA LLPFFDEQGR GQNAVLQHIA IAVCAHLLHS
YTDPGEARGG VAGLSVWQEK AAKDFMIEHF AEDFSFAAAA AAAGLSKRDF INGFSDVAGL
TPSQWLMRHR IVRAKQYLTS RALTLSEVAK RCGFSDVDQF DRAFRRATGT SPSDWRGRWL
N
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