| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3972 |
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| Symbol | |
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| ID | 5319070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 422990 |
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| End bp | 424867 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775781 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001312714 |
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| Protein GI | 150376118 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG ATCTGATCCT GCACCGTGGT CTGGTGACCA CGCTGGACGC CGCGAAACCG
AACGCCACGG CCATCGCCGT CAAGGACGGC AGGTTCCTTG CCGTCGGGCT GGACCAAGAG
GTCATGGCGC TTGCCGGGCC GGACACGAAG GTCGTCGACC TGAAGGGCAA GCGCGTCCTG
CCTGGCCTCA ATGACAACCA TACCCACGTT GTGCGCGGTG GGCTTAATTT CAATATGGAA
CTGCGCTGGG ACGGCGTGCG CTCTCTCGCC GACGCCATGA ACATGCTGAA GCGGCAAGTG
GCGATCACGC CGCCTCCGCA ATGGGTGCGC GTCGTCGGCG GCTTCACCGA ACATCAGTTC
ATTGAAAAGC GGCTTCCGAC GATCGACGAG ATCAACGCGA TCGCCCCCGA CACGCCGGTG
TTCCTCCTGC ACCTTTATGA CCGGGCACTG CTCAACGGCG CGGCATTGCG CGCGGTTGGT
TACGGCAAGG ACACGCCGGA TCCGCCCGGA GGTGAGATCA CCCGGGACGC CAGGGGCAAT
CCGACCGGGC TGCTCATCGC CAAGCCGAAT GCGGGCATTC TCTATTCGAC GCTTGCCAAG
GGACCGAAGC TTCCATTGGA ATATCAGGTC AATTCGACTC GGCACTTCAT GCGCGAGCTC
AATCGGCTCG GGATCACCAG CGTCATCGAC GCGGGCGGCG GCTTCCAGAA CTATCCAGAC
GACTACGCCG TCATTCAGAA GCTCGCCGAC GAAGGGCAGA TGACGGTGAG ACTTGCCTAC
AACCTCTTCA CCCAGAAGCC GAAGGAGGAG AAGGAAGACT TTCTCAAGTG GACGTCCTCC
GTAAAATACA AGCAGGGCGA TGACTTCTTC CGTCACAACG GCGCTGGCGA AATGCTCGTC
TTCTCTGCGG CAGACTTCGA GGATTTCCGC GAACCGCGCC CGGAAATGGC GCCCGAAATG
GAAGGTGAGC TTGAGGAAGT CGTGCGAATT CTAGCGGAGA ACCGCTGGCC CTGGCGCCTG
CACGCGACAT ACGACGAGAC GATCAGCCGT GCGCTCGACG TCTTCGAGAA AGTCAACCAG
GACATCCCGC TTGCCGGCAT CAACTGGTTC TTCGACCATG CCGAGACGAT CTCGGACAGC
TCAATCGACC GCATCGCGGC GCTGGGCGGC GGCATAGCGG TACAGCATCG CATGGCCTAT
CAGGGCGAGT ATTTCGTCGA ACGCTATGGC CATGGTGCCG CCGAAGCTAC GCCGCCGGTC
GCGCGCATGC TGGATAAAGG CGTCAAGGTC TCCGCGGGCA CGGACGCCAC GCGCGTCGCC
TCCTACAATC CCTGGGTTTC GCTTTCCTGG CTGGTGACCG GTAAGACGGT CGGCGGTATG
CAGCTCTATC CGCGCGCCAA CTGCCTCGAC CGCGAAACGG CGCTGCGGAT GTGGACCGAG
AAAGTCCAAT GGTTTTCCAA CGAGGAGGGC CGGAAGGGCC GCATCGAAAA GGGGCAGCTC
GCCGACCTTA TCGTGCCGGC CAAAGACTAT TTCACCTGTG CCGAGGACGA GATCTCGTTT
CTGACTGCCG ATCTGACGAT GGTCGGGGGC AGGATCGTCT ATGCGGCAAA CGATTTCGCC
AGCCTCGACG AGAACCCTCT GCCGCCGGCG ATGCCCGACT GGTCGCCGGT AAGGAACTAT
GGCGGCTATG CGGCGTGGGG CGAACCGGAG GGCGCGGGAA GGCATTCGCT GAAGCGAACG
GCAATCGCGT CCTGCGGCTG CGCCAGCAAT TGCGGGGTCC ATGGGCACGA CCATGCCGGC
GCCTGGACAT CGAGACTGCC GGTTGCAGAC CTGAAAGGGT TCTTCGGCGC GCTTGGCTGC
TCTTGCTGGG CCGTGTGA
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| Protein sequence | MSADLILHRG LVTTLDAAKP NATAIAVKDG RFLAVGLDQE VMALAGPDTK VVDLKGKRVL
PGLNDNHTHV VRGGLNFNME LRWDGVRSLA DAMNMLKRQV AITPPPQWVR VVGGFTEHQF
IEKRLPTIDE INAIAPDTPV FLLHLYDRAL LNGAALRAVG YGKDTPDPPG GEITRDARGN
PTGLLIAKPN AGILYSTLAK GPKLPLEYQV NSTRHFMREL NRLGITSVID AGGGFQNYPD
DYAVIQKLAD EGQMTVRLAY NLFTQKPKEE KEDFLKWTSS VKYKQGDDFF RHNGAGEMLV
FSAADFEDFR EPRPEMAPEM EGELEEVVRI LAENRWPWRL HATYDETISR ALDVFEKVNQ
DIPLAGINWF FDHAETISDS SIDRIAALGG GIAVQHRMAY QGEYFVERYG HGAAEATPPV
ARMLDKGVKV SAGTDATRVA SYNPWVSLSW LVTGKTVGGM QLYPRANCLD RETALRMWTE
KVQWFSNEEG RKGRIEKGQL ADLIVPAKDY FTCAEDEISF LTADLTMVGG RIVYAANDFA
SLDENPLPPA MPDWSPVRNY GGYAAWGEPE GAGRHSLKRT AIASCGCASN CGVHGHDHAG
AWTSRLPVAD LKGFFGALGC SCWAV
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