| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3964 |
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| Symbol | |
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| ID | 5319062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 413700 |
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| End bp | 414686 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775773 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001312706 |
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| Protein GI | 150376110 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0348412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGGA CTTTTGTGAC TGCCGAAGAG GTCGCAAAGC GTGCGGGCGT GTCGCGCTCG
GCGGTATCGC GCACCTTCAC CCCCGGCGCC AGCGTCTCGA AGGCGGTCCG GCGCAAGGTC
CTGAAAGCCG CTGGGGAGCT GGGTTACCGC GTCAATCGCC TAGCGCAGGT GCTGAACAAT
GACCGATCCA ACCTGATCGG CGTGGTCGGC GCCAATCTCT CCTCGCCTTT CATTTCGAAG
CAGCTCGACC TGTTGAGCAT CGGGCTCCTG CGCCAGGGTA AGCAATGCCT GCTTCTGAAC
GCCGCGGACG CGCGACAGGA CATTGCGCCT CTGATCGAAC TCCTTTTCGA GTTCCGCGCC
CAGGCTATCG TCGTGCTCTC CGGGGAACCC CCGGGATCGA TCGTCGACGA ATGCATTGCC
AATGGCGTGC GTCTCATCCT TATCAACCAG CGCCTCGATC GCACGGATAC GAACATGGTG
CTGAGTGACG ATTCGCATGG GGCGGACCTC GCCGCCCTGC GGCTGATCAA AGCGAATTGC
AGAAAGGTCG CGGTCGTGAC CAGCGGCAGC CAGACCCCCG CCCAGCTGCG GAGGGCCAAC
GCGTTCACGC AGCGAATGCA GGCCGAGGGA GTGGAGGTCG TCGCCTGGTC GGGCGGGCCG
ACGAGCTACG AATCCGGGCT GCAGGCGGGA CGCGAGCTTC TGGCCGACAA GGCGATCGAC
GGCGCCTTCT GTGTAACCGA CCTTCTCGCG CTGGGATTTC TCGATGCCGC ACGGCTGGAA
ATGAACCGCC GCGTTCCGCA GGACATTTCG ATTCTCGGCT TCGACGACAT TCCGCAGGCC
GGCTGGAAGA GCTACGAACT CACGACGGTT GCACAGTCCT TCGAATCGCT GACGGAGAAG
GTCCTTTCCG CTCTCGACAG CGACGATCTG GAAACGCGGC TGCAGGTCGT GCCGGTAACA
TTAGTGGAGC GGCAGACGGC GCGCTAG
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| Protein sequence | MARTFVTAEE VAKRAGVSRS AVSRTFTPGA SVSKAVRRKV LKAAGELGYR VNRLAQVLNN
DRSNLIGVVG ANLSSPFISK QLDLLSIGLL RQGKQCLLLN AADARQDIAP LIELLFEFRA
QAIVVLSGEP PGSIVDECIA NGVRLILINQ RLDRTDTNMV LSDDSHGADL AALRLIKANC
RKVAVVTSGS QTPAQLRRAN AFTQRMQAEG VEVVAWSGGP TSYESGLQAG RELLADKAID
GAFCVTDLLA LGFLDAARLE MNRRVPQDIS ILGFDDIPQA GWKSYELTTV AQSFESLTEK
VLSALDSDDL ETRLQVVPVT LVERQTAR
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