Gene Smed_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3958 
Symbol 
ID5318192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp406237 
End bp406857 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content62% 
IMG OID640775767 
ProductDual specificity protein phosphatase 
Protein accessionYP_001312700 
Protein GI150376104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGT TGGACCCAGA CCCGCAATCG ATCGCCGCCG AACTCCCGAA GCTCAGCCTG 
ATTTATGAGA AGCATCCGCT CTATCAAGTC GATCTCTTCA TCAGCGGCAA GGAAGGTGCC
AGCGATCTGG AGCTCCTGCG CCAGAATGGC GTCACCACCG TGGTCAACTG TGCGGTAAAC
CTGGACTTCA ACTATGTGCG ACGGGCCGGC CTCGTATCCG ATCACGAGGG CAGCGCCTAT
GGACCGGGCG AAATCCGTTA CTACAAGATC GGCTTGATCG ACGGTTCCGG CAACCCGGAC
ACGCAGATGG TCGCGGCCTA TTTCATCCTG CGTGCGGCGC TGGAGCAGGT ATTGCCGGAG
AAGCCCTCCT ATCCGAGGCG GGAGCGGGGC AACGTACTCG TGAACTGTCG GGGAGGGCGC
TCTCGCTCGG TCATCGTCAT GGCACTGTTC CTGCACCTGA CGCTCCCATC GCAGTTCACG
ACCCTGGATG CGGCGATCGC GCATATCCGC GAACACCGCC GCCTTTCGCG CGCAGAGTGG
TACAAGGCGC CAAAACCTGT TCTGATCGAG GCCGCCGCCC GTGCAGCGGA CTGGATCCGC
CTGATCGAGG GTGTCCGATG A
 
Protein sequence
MQQLDPDPQS IAAELPKLSL IYEKHPLYQV DLFISGKEGA SDLELLRQNG VTTVVNCAVN 
LDFNYVRRAG LVSDHEGSAY GPGEIRYYKI GLIDGSGNPD TQMVAAYFIL RAALEQVLPE
KPSYPRRERG NVLVNCRGGR SRSVIVMALF LHLTLPSQFT TLDAAIAHIR EHRRLSRAEW
YKAPKPVLIE AAARAADWIR LIEGVR