| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3946 |
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| Symbol | |
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| ID | 5318054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 395702 |
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| End bp | 396829 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775756 |
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| Product | S-(hydroxymethyl)glutathione dehydrogenase |
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| Protein accession | YP_001312689 |
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| Protein GI | 150376093 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.136924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTC GCGCTGCTCT GGCCGTCGAG GCCGGAAAAC CCCTTGTCGT GACTGAAGTC
GAGCTCGAAG GGCCGCGGGC CGGCGAGGTT CTGGTCGAGG TGAAGGCGAC CGGCATCTGC
CATACCGACG ACTTCACGCT TTCGGGGGCG GATCCGGAAG GGCTGTTCCC GGCGATCCTC
GGCCATGAGG GCGCCGGCAT CGTCGTCGAT GTCGGCCCGG GCGTCACCAG CGTCAGGAAG
GGCGACCACG TCATCCCGCT CTATACGCCG GAATGCCGCT CCTGCCCCTC CTGCCTGTCG
CGCAAGACCA ATCTGTGCAC CGCCATCCGC GCCACCCAGG GCCAGGGGCT GATGCCGGAC
GGCACCTCGC GCTTCTCGAT CGGTGGCGAC AAGATCCACC ATTATATGGG CTGCTCGACC
TTTTCGAACT TCACCGTGCT GCCGGAGATC GCCGTCGCCA AGGTCAATCC GGACGCCCCC
TTCGACAAGA TCTGCTATAT CGGCTGCGGC GTCACCACCG GCATCGGCGC GGTGATCAAC
ACCGCACGGG TGGAGATCGG CGCCACCGCC ATCGTCTTCG GCCTCGGCGG CATCGGGCTC
AACGTCATCC AGGGGCTTCG CCTGGCCGGC GCCGACATGA TCATCGGCGT CGACCTGAAC
AACGACAAGA AGCCCTGGGG CGAAAAGTTC GGCATGACCC ACTTCGTCAA TCCGAAGGAA
GTGGGCGAGG ACATCGTGCC CTATCTCGTC AATCTGACGA AGCGCGGTGC CGATCAGATC
GGCGGCGCCG ACTACACCTT CGACTGCACC GGCAACACCA GGGTCATGCG CCAGGCGCTG
GAAGCCTCGC ATCGCGGCTG GGGCAAGTCG GTGATCATCG GCGTTGCCGG GGCCGGTCAG
GAGATCTCGA CCAGGCCGTT CCAGCTCGTC ACCGGCCGCA CCTGGATGGG CACCGCCTTT
GGCGGCGCGC GCGGGCGCAC CGACGTCCCG AAGATCGTCG ACTGGTACAT GGAGGGCAAG
ATCGAGATCG ATCCGATGAT TACCCACACC ATGCCGCTCG AGGACATCAA CAAGGGGTTC
GAACTCATGC ATTCCGGCGA GAGCATTCGA AGCGTGGTCC TCTATTGA
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| Protein sequence | MRTRAALAVE AGKPLVVTEV ELEGPRAGEV LVEVKATGIC HTDDFTLSGA DPEGLFPAIL
GHEGAGIVVD VGPGVTSVRK GDHVIPLYTP ECRSCPSCLS RKTNLCTAIR ATQGQGLMPD
GTSRFSIGGD KIHHYMGCST FSNFTVLPEI AVAKVNPDAP FDKICYIGCG VTTGIGAVIN
TARVEIGATA IVFGLGGIGL NVIQGLRLAG ADMIIGVDLN NDKKPWGEKF GMTHFVNPKE
VGEDIVPYLV NLTKRGADQI GGADYTFDCT GNTRVMRQAL EASHRGWGKS VIIGVAGAGQ
EISTRPFQLV TGRTWMGTAF GGARGRTDVP KIVDWYMEGK IEIDPMITHT MPLEDINKGF
ELMHSGESIR SVVLY
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