Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3945 |
Symbol | |
ID | 5318053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 394863 |
End bp | 395693 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640775755 |
Product | S-formylglutathione hydrolase |
Protein accession | YP_001312688 |
Protein GI | 150376092 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.897116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTG TAACGCAAAG CCAATGTTTC GGGGGGACCC AGTCGGTCTA CCGCCACGCC TCCGAGGTTT GCGGCGTCGA GATGACATTC GGCCTGTATT TGCCGCCTCA GGCCCGGAAG CGCTCCGTGC CGCTCCTGTG GTACCTCTCC GGGCTGACAT GCACCCATGA GAATGCAATG ATCAAGGCGG GCCTGCAGCG GCACGCGGCC GAGCAGGGGC TGGCGCTGAT TTTCCCCGAC ACCTCGCCGC GCGGCGACGG AGTGGCCGAT GACGAGGCCT ACGATCTTGG ACAGGGCGCC GGCTTTTACG TTAATGCGAC GCAGAAGCCC TGGTCGCCGC ACTATCGCAT GTATGATTAC ATCGTCACCG AATTGCCGGC CCTGTTGCAG GCGCAGCTGC CGGTCAACGG CGTCAACGGC ATTACCGGGC ACTCGATGGG CGGCCATGGT GCCCTCACCA TCGCCTTTCG CAATCCGAAA CTGTTCCGAT CCGTCTCGGC CTTTGCGCCG ATCGTCAATC CGACCCGGTC CGATTGGGGG CGCAAGCAGT TTTCCGCCTA TCTCGGCGAC GACGAGGCCG ATTGGGGCAG CTATGACGCC TGCCTGCTGC TCAGCGAACT CGGCTGGCAC GGCGATATCC TCATCGACCA GGGCGCGGCG GACCAGTTTC TCACCGAGCT GCAGCCCGAG GCGATGGCCC GGTTGCTGGC GGAGCGTCGG CAAGCCGGCG TCGTACGGCT GCAGGCGGGA TATGACCACA GTTACTATTT CGTGGCGAGC TTTGGCGAAG ACCATGTGCG CTGGCATGCA GAGCGGCTGA ACGCCGCGTA A
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Protein sequence | MELVTQSQCF GGTQSVYRHA SEVCGVEMTF GLYLPPQARK RSVPLLWYLS GLTCTHENAM IKAGLQRHAA EQGLALIFPD TSPRGDGVAD DEAYDLGQGA GFYVNATQKP WSPHYRMYDY IVTELPALLQ AQLPVNGVNG ITGHSMGGHG ALTIAFRNPK LFRSVSAFAP IVNPTRSDWG RKQFSAYLGD DEADWGSYDA CLLLSELGWH GDILIDQGAA DQFLTELQPE AMARLLAERR QAGVVRLQAG YDHSYYFVAS FGEDHVRWHA ERLNAA
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