| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3941 |
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| Symbol | |
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| ID | 5318522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 391028 |
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| End bp | 391885 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775751 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001312684 |
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| Protein GI | 150376088 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.792832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA GGCTTGCCTC GGCCACGAGT AGCCTCTTGA CAGCGGCCGG CATTATGCTG
CCAGCGGTCG CCGGCTCCCA GCCCGCGGCA GCTCAGACAT CGGACCTTGT GTCGAAGACG
GCGTTTCGGG TTTGTGCCGA TCCCGCCAAT CTGCCTATGT CCGATCGCGA GGGTGCGGGA
TACGAAAACA AGATCGCCGA ACTGATGGCA TCCAAGCTCG GACTGCCGCT GGAGTACACC
TGGTTTCCGA TGGCGACCGG CTTCGTCCGC AAGACCCTGC AGGCCAATGC CTGCGATGTG
GTCATCGGAT TTGCACAGGG TGACGAGATG GTTCTCAACA CCAATCACTA TTACACCTCG
GCCTATGTGC TGATCGCCGC GTCCGGCGGT CCGCTTGCCG GTGTGACGAC GCTCGCCGAT
CCTCTTCTCA AGGACAAGCG CATCGGCATC GTCGCCGGAA CGCCGCCGGC GACCCATATG
GCAAGAAACG GACTGCTGCT CAAGGCGAAG GGGTATCATC TGATGGTCGA CCGCCGGTAC
GAAGACCCGG CCGACGACAT GCTCAAGGAC CTGGAATCCG GCGCTCTCGA TGCGGCGATC
CTATGGGGCC CGATCGGTGG CCCCCTCGTC AAGGCGAGCC ATCCAAAGCT GAAGGCGACC
CCGCTCCTGG CGGAGTCCAC TCCACCGAGG CTTTTCTACC GCATTACCAT GGGCGTTCGC
CAGGGCGAAA AGGTCTGGGA GCGCAAGTTG AATTCCCTCA TTCGTCGCAA TCAGTCCGAA
ATAAACGCCA TTCTCGCCGA TGCCGGCGTG CCGCTCCTGA ACGACATGGG AACCGGTCCT
CTCGAGACGC CGAAATGA
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| Protein sequence | MLKRLASATS SLLTAAGIML PAVAGSQPAA AQTSDLVSKT AFRVCADPAN LPMSDREGAG
YENKIAELMA SKLGLPLEYT WFPMATGFVR KTLQANACDV VIGFAQGDEM VLNTNHYYTS
AYVLIAASGG PLAGVTTLAD PLLKDKRIGI VAGTPPATHM ARNGLLLKAK GYHLMVDRRY
EDPADDMLKD LESGALDAAI LWGPIGGPLV KASHPKLKAT PLLAESTPPR LFYRITMGVR
QGEKVWERKL NSLIRRNQSE INAILADAGV PLLNDMGTGP LETPK
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