Gene Smed_3928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3928 
Symbol 
ID5318764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp380274 
End bp380840 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content60% 
IMG OID640775738 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001312671 
Protein GI150376075 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTA CACCACCCCT TTGCGATTTC GGCCGGCCGG CGATCGATGC CAGGCTTCCG 
GGCGTCGATG GCTCCTCGCA CTCCATATTC GATCAGGCCG GCCCGAAGGG GCTCGTGCTT
GCCTTCATCT GCAATCACTG CCCCTACGTC AAAGCAGTCA TTGCCCGGAT CGTCCGGGAC
GCGAGCGACC TTAGGGCTCA TGGCGTCGGC TTTGTGGCGA TCAACTCCAA CGACTCCGGC
AACTATCCGC AGGACTCGTT CGAGAACATG AAGCGTTTCG CTTCGCAGAA CGCCCTCCCC
TTTCCCTATC TCCACGACGA AGACCAATCC GTCGCCAAAG CCTACGGCGC CGTCTGCACA
CCCGACTTCT TCGGTTTCAA CAAGGATATG AGATTGCAAT ATCGCGGTCG GCTGGACGCT
TCGCGCAAGG AAATCGGCCC TGCCGATCTG AGACGCGACC TGTACGAAGC CATGGTCATG
GTGGCGATGT TCGGCAAGGG ACCGGCGGAG CAGCAGCCCT CCATAGGCTG TACCATCAAG
TGGAAGGTTT CGGCGTTTCA GGTTTGA
 
Protein sequence
MAATPPLCDF GRPAIDARLP GVDGSSHSIF DQAGPKGLVL AFICNHCPYV KAVIARIVRD 
ASDLRAHGVG FVAINSNDSG NYPQDSFENM KRFASQNALP FPYLHDEDQS VAKAYGAVCT
PDFFGFNKDM RLQYRGRLDA SRKEIGPADL RRDLYEAMVM VAMFGKGPAE QQPSIGCTIK
WKVSAFQV