Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3928 |
Symbol | |
ID | 5318764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 380274 |
End bp | 380840 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640775738 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001312671 |
Protein GI | 150376075 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTA CACCACCCCT TTGCGATTTC GGCCGGCCGG CGATCGATGC CAGGCTTCCG GGCGTCGATG GCTCCTCGCA CTCCATATTC GATCAGGCCG GCCCGAAGGG GCTCGTGCTT GCCTTCATCT GCAATCACTG CCCCTACGTC AAAGCAGTCA TTGCCCGGAT CGTCCGGGAC GCGAGCGACC TTAGGGCTCA TGGCGTCGGC TTTGTGGCGA TCAACTCCAA CGACTCCGGC AACTATCCGC AGGACTCGTT CGAGAACATG AAGCGTTTCG CTTCGCAGAA CGCCCTCCCC TTTCCCTATC TCCACGACGA AGACCAATCC GTCGCCAAAG CCTACGGCGC CGTCTGCACA CCCGACTTCT TCGGTTTCAA CAAGGATATG AGATTGCAAT ATCGCGGTCG GCTGGACGCT TCGCGCAAGG AAATCGGCCC TGCCGATCTG AGACGCGACC TGTACGAAGC CATGGTCATG GTGGCGATGT TCGGCAAGGG ACCGGCGGAG CAGCAGCCCT CCATAGGCTG TACCATCAAG TGGAAGGTTT CGGCGTTTCA GGTTTGA
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Protein sequence | MAATPPLCDF GRPAIDARLP GVDGSSHSIF DQAGPKGLVL AFICNHCPYV KAVIARIVRD ASDLRAHGVG FVAINSNDSG NYPQDSFENM KRFASQNALP FPYLHDEDQS VAKAYGAVCT PDFFGFNKDM RLQYRGRLDA SRKEIGPADL RRDLYEAMVM VAMFGKGPAE QQPSIGCTIK WKVSAFQV
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