| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3922 |
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| Symbol | |
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| ID | 5318707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 373568 |
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| End bp | 375655 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775732 |
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| Product | transketolase |
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| Protein accession | YP_001312665 |
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| Protein GI | 150376069 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTT CGCAGCAGAT CGAACCCCGC GCCGCCGCCT CGGAGCGCAA CATGGCCGAC
GCCATCCGGT TTCTTTCCAT GGATGCCGTC GAGAAGGCCA ATTCCGGTCA TCCGGGCATG
CCGATGGGCA TGGCGGACGC GGTTACCGTG CTCTTCAACC GCTTCATCAG AATCGATCCG
TCGCTCCCCG ACTGGCCCGA CCGCGACCGT TTCGTGCTTT CGGCCGGCCA TGGCTCGATG
CTGCTCTATT CCCTCCATCA CCTCATCGGC TTTGCGGACA TGCCGATGGC CGAGCTTTCG
TCCTTCCGGC AACTCGGCTC GAAAACGGCC GGCCATCCCG AATACGGCCA TGCCCTCGGC
ATCGAGACCA CCACCGGCCC GCTGGGCCAG GGGATCTCGA CCGCTGTCGG GATGGCGATG
GCCGAACAGA TGATGGCCTC CCGGTTCGGC AGTGCTCTGT GCAACCACTT CACCTATGTC
GTAGCCGGCG ACGGCTGCCT TCAGGAAGGC ATCAGCCACG AGGCTATCGA CCTTGCCGGA
CATTTAAAGC TGCGCAAGCT GGTCGTGCTG TGGGACGACA ACCGAATATC GATCGACGGA
TCGACGGATC TCTCTACCTC GATGAACCAG CTCGCGCGTT TCCGCGCCGC CAGCTGGGAC
GCCCAAGCCG TCGATGGCCA CGACCCGGAA GCGGTTGCGA AAGCCCTGGA AAGAGCACGC
CGGACCCGCA AGCCGTCGCT GATCGCCTGC CGCACCCGGA TCGGCAAGGG TGCAGCCAGC
ATGGAAGGCT CGCACAAAAC CCACGGCGCG GCGCTCGGCG ACAAGGAAAT CGCAGCCACA
CGCGAAAAAC TTGGCTGGCC GCATCCGCCC TTCTTCGTTC CGCCTGAGAT AAGGGCTGCC
TGGGCAAAGG TGGCGGCTCG AGGTCGCACG GCTCGCGAGG CCTGGGATAT CCGCCTCGAC
GCCTCGCGCT CGAAAAAGCG CTACGAGCAG ACCATAAGGC GGCAGTTTGA CGGCGAACTC
GGCGATCTGC TTGCAAAATT CCGGAGCGCG CATCGCACAA GGGCTACGAA AGTTGCGACG
CGTCAGGCCT CGCAGATGGC GCTGGAGGTC ATAAACGGCG CGACCGCTTT GACGATCGGC
GGCTCGGCCG ACCTGACCGG CTCCAACCTG ACGATGACCT CGCAGACCCA GCCCATCTCG
CCGGGCAATT TCAAGGGCCG TTATCTGCAT TACGGCATCC GCGAGCACGG CATGGCGGCC
GCTATGAACG GCATCGCGCT TCATGGCGGC TTCATCCCCT ATGGCGGCAC TTTCCTGGTC
TTCTCCGACT ATGCCCGCGG TGCGATGCGC CTCTCGGCCC TGATGGGCCT GCCCGTCATT
TACGTGCTGA CGCATGATTC CATCGGGCTC GGCGAGGACG GACCGACCCA CCAGCCGGTC
GAGCATCTGG CCATGCTGCG CGCCACGCCC AACCTCAACG TTTTCCGGCC GGCCGACATC
ATCGAGACGG CAGAATGCTG GGAGATCGCG CTTGGCGAGA AGAATACGCC GAGCGTCCTC
GCCCTTTCGC GTCAGGCCCT GCCGATGCTG CGCCGGACGG AAGGCAACGA GAACCAGTCG
GCGCTCGGGG CGTATGTTCT GAGGGAAGCG CGCGGCAACC GGGACATCAC GATCCTTGCC
ACGGGATCCG AAGTCGAGAT CGCCGTCGCT GCCGCCGAGC GCCTGCAGGC CGAGGAAGGC
ATCGCGGCGG CAGTGGTCTC CATGCCCTGC TGGGAGAAGT TCGAGGTTCA GGACCTTGCC
TATCGGAGGA AGGTCCTCGG CGACGCGCCC CGCATCGCCA TCGAGGCGGC GGGCCGGCTC
GGCTGGGACC GATGGATGGG GCCGGACGGT GCCTTCGTCG GCATGACCGG CTTTGGTGCC
TCGGCACCGG CAGGCGACCT CTACCGGCAT TTCGGCATTA CCGCCGACCA TGTCGTCGCA
GAAGCCCTGG AGCTTCTCCG CCGCGCATAC TCGGAAACTC TGCCCATAGG TGCCCGGATC
GGTCCGCACC CATCCGCACA CACCGTCAGA TCATCGCAGG AGGCATGA
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| Protein sequence | MNVSQQIEPR AAASERNMAD AIRFLSMDAV EKANSGHPGM PMGMADAVTV LFNRFIRIDP
SLPDWPDRDR FVLSAGHGSM LLYSLHHLIG FADMPMAELS SFRQLGSKTA GHPEYGHALG
IETTTGPLGQ GISTAVGMAM AEQMMASRFG SALCNHFTYV VAGDGCLQEG ISHEAIDLAG
HLKLRKLVVL WDDNRISIDG STDLSTSMNQ LARFRAASWD AQAVDGHDPE AVAKALERAR
RTRKPSLIAC RTRIGKGAAS MEGSHKTHGA ALGDKEIAAT REKLGWPHPP FFVPPEIRAA
WAKVAARGRT AREAWDIRLD ASRSKKRYEQ TIRRQFDGEL GDLLAKFRSA HRTRATKVAT
RQASQMALEV INGATALTIG GSADLTGSNL TMTSQTQPIS PGNFKGRYLH YGIREHGMAA
AMNGIALHGG FIPYGGTFLV FSDYARGAMR LSALMGLPVI YVLTHDSIGL GEDGPTHQPV
EHLAMLRATP NLNVFRPADI IETAECWEIA LGEKNTPSVL ALSRQALPML RRTEGNENQS
ALGAYVLREA RGNRDITILA TGSEVEIAVA AAERLQAEEG IAAAVVSMPC WEKFEVQDLA
YRRKVLGDAP RIAIEAAGRL GWDRWMGPDG AFVGMTGFGA SAPAGDLYRH FGITADHVVA
EALELLRRAY SETLPIGARI GPHPSAHTVR SSQEA
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