Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3921 |
Symbol | |
ID | 5318706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 372688 |
End bp | 373557 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640775731 |
Product | phosphoribulokinase |
Protein accession | YP_001312664 |
Protein GI | 150376068 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCCA AATACCCAAT CATCTCCATC ACAGGTTCGT CCGGCGCCGG CACCACGACC GTCAAGGACA CGTTCGAGAA GATATTCAAG CGCGAAAACA TCTCGGCATC CTTTATCGAG GGCGATGCCT TCCACCGCTA CGACCGAGAA ACCATGCGCA GCAAGATCGC GGAGGAAAAA GCCCGAGGCG TCGACTTCAC GCATTTCTCC GCCGAGGCGA ACGAACTGGA GATCCTCGAA AGCGTCTTTG CCGAGTACGG CAGGCGTGGC GTCGGGCGCA CCCGTCACTA TGTGCACGAC GATGCCGAGG CAGTGAAATT CGGTTCGGAC CCCGGCACGT TCACGGATTG GGAAGAGTTC AGAGACAGCG ATCTCCTCTT CTATGAAGGC CTGCATGGCT GCGCCGTCAC CGACACCATC AACCTCGCCC AGCATTGCGA TCTGAAGATC GGAGTGGTCC CCGTGATCAA TCTCGAATGG ATCCAGAAGA TCCATAGAGA CAAGGCTACC CGCGGTTATT CCACCGAGGC CGTGACCGAC ACCATCCTGC GGCGCATGCC CGACTATGTG CACTACATCT GCCCGCAGTT CTCCCTGACG GACATCAACT TCCAACGCGT ACCGATCGTC GACACATCCA ATCCCTTCAT CGCCCGCTGG ATCCCGACGC CGGCCGAATC CATCCTGGTC ATCCGTTTTG CCAAGCCGCA AAGCATCGAT TTCCCCTACC TGCTGTCGAT GCTGCACAAC AGCTACATGT CGCGCGCCAA TTCCATCGTG GTGCCGGGCG ACAAGCTCGA TCTAGCCATG CAGCTGATCT TCACCCCGCT CATTCACAAG CTGCTCGAGC GCAAGCACCG CATGTCGTGA
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Protein sequence | MSAKYPIISI TGSSGAGTTT VKDTFEKIFK RENISASFIE GDAFHRYDRE TMRSKIAEEK ARGVDFTHFS AEANELEILE SVFAEYGRRG VGRTRHYVHD DAEAVKFGSD PGTFTDWEEF RDSDLLFYEG LHGCAVTDTI NLAQHCDLKI GVVPVINLEW IQKIHRDKAT RGYSTEAVTD TILRRMPDYV HYICPQFSLT DINFQRVPIV DTSNPFIARW IPTPAESILV IRFAKPQSID FPYLLSMLHN SYMSRANSIV VPGDKLDLAM QLIFTPLIHK LLERKHRMS
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