Gene Smed_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3916 
Symbol 
ID5318701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp368105 
End bp368401 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content63% 
IMG OID640775726 
Productcoenzyme PQQ synthesis D 
Protein accessionYP_001312659 
Protein GI150376063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG ATCAGCCTAT GATTTCAGGA TCGAGCGTCG TCAAGCTGGC GCGAGGGGTT 
AGGCTGCACG AGGATACGGT TCGCGGCCAG ACGGTGCTCC TTGCCCCGGA ACGGGCAATG
GCGGTGGACG ATATAGCCGT CGCAATCGTC CAGGCGCTTG ACGGCGAGAG GACCCTTGAT
GATATCGCCG CCGGCTTTGC CGAGAAGTTC GACGCCCCGG TCGCAGAGAT CGCCGGAGAC
GTCACGGCGT TCGTGCAGGA GCTTTCCGTC CGCCGCATGC TGGAGATCGT CCAATGA
 
Protein sequence
MTADQPMISG SSVVKLARGV RLHEDTVRGQ TVLLAPERAM AVDDIAVAIV QALDGERTLD 
DIAAGFAEKF DAPVAEIAGD VTAFVQELSV RRMLEIVQ