| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3911 |
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| Symbol | |
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| ID | 5318645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 363994 |
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| End bp | 364668 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775721 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001312654 |
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| Protein GI | 150376058 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC TGATGGTTCT GACTTCGCAT GACCGGCTCG GCGATACAGG CAAGCCGACC
GGATTCTGGC TGGAGGAATT CGCTGCACCC TATTACGTGT TCAAGGACGC GGGGGCAGAG
GTCACGCTGG CATCACCGAA GGGCGGGCAG CCGCCGATCG ATCCGAAAAG CGACGAGCCA
GCGAGCCAGA CTGCGGCGAT GGAGCGCTTC AGGGACGACC CCGCCGCGCG GGACAGATTG
GCAAACACAC TGAAGCTCGG TGACGTCAGA CAGGAGGGCT ACGACGCGGT GTTCTATCCG
GGCGGACACG GGCCTATGTG GGACCTCGTT GAAGACAGGA ATTCGATCGC CCTCATCGAA
GGCTTCTACG ATGCGGGCAA ACCGGTCGCG GCCGTCTGCC ATGGCCCGGC CGTCCTGACG
CGGGTCACGC ATCACGGCGA GCCCATCGTC AAGGGAAGGC GCGTCACCGG CTTCACCAAT
TCCGAGGAGG AGGCCGTTCA ACTGACGGAT GTCGTGCCGT TCCTCGTCGA GGACGAATTG
AAGCGCCTCG GTGGGCGCTA CGAGAAGGCG GAGGATTGGG CGGACTTCAC GATCGTGGAC
GGCAAGCTGG TCACCGGCCA GAACCCGTCT TCGTCTACGT CGGCTGCCAT GGAGTTGCTG
AAGCTCCTGC AGTAG
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| Protein sequence | MKILMVLTSH DRLGDTGKPT GFWLEEFAAP YYVFKDAGAE VTLASPKGGQ PPIDPKSDEP
ASQTAAMERF RDDPAARDRL ANTLKLGDVR QEGYDAVFYP GGHGPMWDLV EDRNSIALIE
GFYDAGKPVA AVCHGPAVLT RVTHHGEPIV KGRRVTGFTN SEEEAVQLTD VVPFLVEDEL
KRLGGRYEKA EDWADFTIVD GKLVTGQNPS SSTSAAMELL KLLQ
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