| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3886 |
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| Symbol | |
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| ID | 5318680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 343279 |
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| End bp | 344271 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775698 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001312631 |
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| Protein GI | 150376035 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.025285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA GGATGTCTCA GCGGACGGAC ACGATGTCCG CCGCCATCGT CACCGGGCCG
GGCACGGTGC GCATCGAGAG GTTGCCCTTG CCGCAGCCCG GGCGCGGCCA GGTCCGCATC
CGGCTTGAAG GCTGCGGCGT CTGCGCCTCC AATCTCGTTC CCTGGGCAGG CCCGGAATGG
ATGCGGTTTC CGACGGAGCC GGGGGCGCTC GGACATGAAG GCTGGGGTGT TATCGACGCC
GTTGGCGAGG GCGTGCATGG TTTCTCGCCG GGCGACCGCG TCGCGGCACT CTCCTACAAC
GCCTATGCCA CGCATGACAT CGCCGATCAG AGCGCGATTG CGCGCCTGCC GGCGTCCCTT
GCGGATCAGC CCTTTCCCGG CGAGCCGCTC GGATGTGCCT TCAACATCTT ACGCCGAAGC
GCGATAACGC CGGGAGAAAC CGTGGCGATC ATCGGCATAG GCTTTCTCGG AGTTCTTCTG
ACCGAGCTCG TGAGCGCTGC CGGGGCGCGG GTGATCGCAA TATCGCGCAG GCCGTCATCA
CTCGCCGCGG CCAAGCAGGC GGGTGCGAGC GACGTGATCC CCATGGACGA TCATTGGCGG
ATCATCGAAG AGGTGAAGCA GCTGACCGAC GGGCGCTTCT GCGATTGCGT CATCGAGGCG
GTCGGAAAGC AGTGGCCGCT CGATCTTGCC GGCGAACTGA CGAGGGAGCG CGGCAGGCTT
GTGATTGCAG GTTATCATCA GGACAGCCCG CGACAGGTGA ACATGCAGCT CTGGAACTGG
CGCGGGCTCG ACGTGATCAA CGCGCATGAG CGCGATCCTG CAGTCTATAT GCGCGGCATG
AGAGAGGCGA TCGAGGCGAC GGCAGCCGGG CGCATTTCTC CCGCGCGGCT CTACACCCAT
CGGTTCCCGC TCGAAGAGCT CGGTGCAGCG CTCGACATGA CTCGCGACCG GCCGGAAGGT
TTCATCAAAG CACTGGTGAT CTGCCATGAG TGA
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| Protein sequence | MNIRMSQRTD TMSAAIVTGP GTVRIERLPL PQPGRGQVRI RLEGCGVCAS NLVPWAGPEW
MRFPTEPGAL GHEGWGVIDA VGEGVHGFSP GDRVAALSYN AYATHDIADQ SAIARLPASL
ADQPFPGEPL GCAFNILRRS AITPGETVAI IGIGFLGVLL TELVSAAGAR VIAISRRPSS
LAAAKQAGAS DVIPMDDHWR IIEEVKQLTD GRFCDCVIEA VGKQWPLDLA GELTRERGRL
VIAGYHQDSP RQVNMQLWNW RGLDVINAHE RDPAVYMRGM REAIEATAAG RISPARLYTH
RFPLEELGAA LDMTRDRPEG FIKALVICHE
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