| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3885 |
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| Symbol | |
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| ID | 5318679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 342261 |
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| End bp | 343286 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775697 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001312630 |
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| Protein GI | 150376034 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.037176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.810555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CAATGCAGCT TTCAACGAAA CCGAAGATGG CCACCCGCCC CCGCGTGGGC
TTTCTCGGCG TGGGAAGAAT AGGCTTCCAC CGAATGAAAG CGGTCGTCGA AACCGGATCC
GTCGAAACCG TCGCGATCTT CGATCCGTCG CCGGAAATGG CTGCGGCGGC GCGCGAGCTG
ACGCCGGAAG CCTCGATCGT GAACTCGCTC GAGGCGCTGC TCGACCAAGC GCTCGACGGC
ATCGTCATCG CCTCGCCGAG CGCTCTCCAC GCCGCTCAGT CGATCGTGGC TCTGGAGCAG
GGCGTGGCGG TTTTCTGCCA AAAGCCGCTC GGACGAACGC GCGACGAGAC CGCGGCCGTG
GTCGAAACCG CCCGGCACGT CGACAGGCTG TTGAACGTCG ATCTTTCCTA TCGCTACACC
GAGGGCATGC GACAAATCCG TGATCTGATC GCATCGGGTG AACTCGGGAC CGTCTTCGCC
GTCGATCTCA CCTTTCACAA CGCCTACGGC CCGAGCAAGC CCTGGTTCTA CGACAAGGCG
CTTTCCGGCG GCGGCTGCGT CATAGACCTC GGCGTTCACC TCGTGGATCT GCTTCTTTGG
GTCCTCGGGT TCCCGGACGT CGTGGGGGTG CAAAGCAGGC TCTTTGCCAA GGGCCTTCCC
ATTCGCCGTG ACGGCGACGA AGTCGAGGAC TACGCCATTG CCACGCTTGA GCTCGCAAAC
GGCGTCGTCG CCCGAATGGC ATGCTCATGG CATCTGCAGG CGGGGTGCGA TGCGGTGATC
AGCGCCGATT TCTACGGCAC GGAAGGCGGT GCCAGCCTGA GGAACATCAA CGGATCCTAT
CTCGATTTTT CCGCCGAACG CTATCGCAGC ACGCAACGGG AGGTGCTGGC GCTTCCTCCC
GACAACTGGG GCGGACGAGC GGCCGCCGCC TGGGCGGAAC GCCTCGCGGC AGGAGAGCGC
TTCGACCCCG AAAACGACTA CCTCGTTGCA GTGGCGGACG TGCTGGACAG GATATACGAC
CGATAG
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| Protein sequence | MSDAMQLSTK PKMATRPRVG FLGVGRIGFH RMKAVVETGS VETVAIFDPS PEMAAAAREL
TPEASIVNSL EALLDQALDG IVIASPSALH AAQSIVALEQ GVAVFCQKPL GRTRDETAAV
VETARHVDRL LNVDLSYRYT EGMRQIRDLI ASGELGTVFA VDLTFHNAYG PSKPWFYDKA
LSGGGCVIDL GVHLVDLLLW VLGFPDVVGV QSRLFAKGLP IRRDGDEVED YAIATLELAN
GVVARMACSW HLQAGCDAVI SADFYGTEGG ASLRNINGSY LDFSAERYRS TQREVLALPP
DNWGGRAAAA WAERLAAGER FDPENDYLVA VADVLDRIYD R
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