Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3877 |
Symbol | |
ID | 5318557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 334128 |
End bp | 334730 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640775689 |
Product | hypothetical protein |
Protein accession | YP_001312622 |
Protein GI | 150376026 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTTGC CGGTTGCCGT TCGTGCAAGG GCGGCTCACA AGGCGTCGCG AGTGATGATA TCGACAGGGA AAAGCGCTGA GCAACGGTCC GCCGCTCGAA CCATGCCGAG ACTCGAGCGC AACATAAGCG CCATCCTGAA GCGGCGCGAG GAGGAAGAGC GCGGGCGCCA CGCGCATGAC AGGCTCGCTC AGGCGATCAC GACGTTTGCG GGATCCATGA CTTTCGTCTG CCTGCACGTC CTGGTGTTCG GCGCCTGGAT CGCAGCAAAT CTCGGGCTGG TTCCAAACGT ACCGGTGTTC GATCCGACCT TTGCAATCCT CGCCATGATC GCTTCGGTCG AGGCGATCTT CATCTCCACC TTCGTTCTGA TCAGCCAGAA CCGGATGGCC GAAAAGGACG ACGAGCGTTC CGATCTCAAT CTGCAGATAT CACTCCTTGC AGAGCAGGAG GCGACCCAGT TGCTCACGCT GCTTCGCGAG ATTGCCGGTC GGCTGGGCGT GAAGGTGGAC GGCGAGGAGG ATATCCGTGA ACTCTCAAAG GAAGTCACGC CCGAAGAGAT CCTCAATCGG CTGGAAGACC AGAAGGTCCG GTCGGGCGAA TAG
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Protein sequence | MCLPVAVRAR AAHKASRVMI STGKSAEQRS AARTMPRLER NISAILKRRE EEERGRHAHD RLAQAITTFA GSMTFVCLHV LVFGAWIAAN LGLVPNVPVF DPTFAILAMI ASVEAIFIST FVLISQNRMA EKDDERSDLN LQISLLAEQE ATQLLTLLRE IAGRLGVKVD GEEDIRELSK EVTPEEILNR LEDQKVRSGE
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