Gene Smed_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3877 
Symbol 
ID5318557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp334128 
End bp334730 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content60% 
IMG OID640775689 
Producthypothetical protein 
Protein accessionYP_001312622 
Protein GI150376026 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTTGC CGGTTGCCGT TCGTGCAAGG GCGGCTCACA AGGCGTCGCG AGTGATGATA 
TCGACAGGGA AAAGCGCTGA GCAACGGTCC GCCGCTCGAA CCATGCCGAG ACTCGAGCGC
AACATAAGCG CCATCCTGAA GCGGCGCGAG GAGGAAGAGC GCGGGCGCCA CGCGCATGAC
AGGCTCGCTC AGGCGATCAC GACGTTTGCG GGATCCATGA CTTTCGTCTG CCTGCACGTC
CTGGTGTTCG GCGCCTGGAT CGCAGCAAAT CTCGGGCTGG TTCCAAACGT ACCGGTGTTC
GATCCGACCT TTGCAATCCT CGCCATGATC GCTTCGGTCG AGGCGATCTT CATCTCCACC
TTCGTTCTGA TCAGCCAGAA CCGGATGGCC GAAAAGGACG ACGAGCGTTC CGATCTCAAT
CTGCAGATAT CACTCCTTGC AGAGCAGGAG GCGACCCAGT TGCTCACGCT GCTTCGCGAG
ATTGCCGGTC GGCTGGGCGT GAAGGTGGAC GGCGAGGAGG ATATCCGTGA ACTCTCAAAG
GAAGTCACGC CCGAAGAGAT CCTCAATCGG CTGGAAGACC AGAAGGTCCG GTCGGGCGAA
TAG
 
Protein sequence
MCLPVAVRAR AAHKASRVMI STGKSAEQRS AARTMPRLER NISAILKRRE EEERGRHAHD 
RLAQAITTFA GSMTFVCLHV LVFGAWIAAN LGLVPNVPVF DPTFAILAMI ASVEAIFIST
FVLISQNRMA EKDDERSDLN LQISLLAEQE ATQLLTLLRE IAGRLGVKVD GEEDIRELSK
EVTPEEILNR LEDQKVRSGE