Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3870 |
Symbol | |
ID | 5318869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 327573 |
End bp | 328610 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640775682 |
Product | malate/L-lactate dehydrogenase |
Protein accession | YP_001312615 |
Protein GI | 150376019 |
COG category | [C] Energy production and conversion |
COG ID | [COG2055] Malate/L-lactate dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAGA CAACCACCCT GACGACCACC GCGCTTCACG AGCGCGTCGA GGCGATCTTC CGGAAGGGCG GCCTTAACGT GGTACAGGCG GGCGCTCTCG CCCGGGTGAT CGTTGCCGGC GAGCGGGATG CCTGCAAGTC GCACGGTATC TACCGGATCG AAGGCGCGCT GCGCACGGTG AAGGCCGGCA AGGTTAAGCC GGACGCGATA CCGGAAATCA TCGCGCAGGA GGCCTCGGCG ATCGTCAAGG TGAACGCCGG AGGCGGCTTC GCCAATCCCG CCTTCGAGCT CGGCCTGCCG GTACTCGCCG AGCGCGCTCG TACGCAGGGC ATCGCGGCGC TCGCCATCAA CGACTGCACG CATTTTTCCG CGCTTTGGCC GGAAGCGGAG GCGCTCACGG GAGAAGGGCT TGCCGGCCTC GTCATGTGCC CGAGCTATGC GACGGTCGCG CCGACCGGCG GCAACAAGCC GCTTCTTGGC ACCAATCCTT TCGCCTTCGG CTGGCCCCGC GCCGGCAGAC CACCCTACGT CTTCGACTTT GCAACCTCCG TCGCGGCGCG CGGCGAGATC GAGCTGCACC GCCGCGCCGG CAAGGCTCTG CCCGACGGCT GGGCGATCGA TGCTAAGGGC AATCCCACGA CCGACCCCGA GGCCGCGCTC GCGGGTGCCA TGCTGCCCTT CGGCGGACAC AAGGGCTCGG CTATCGGTAC GATGATCGAA CTCCTGGCGG GAATCATGAT CGGCGACCTG ACGAGCCCCG AAGTGCTCGA CTATCTCGGA ACCACCACGC TCGCGCCGTT CCACGGCGAA TTGATCATCG CCTTCTCGCC GGAGGCTTTC GCCGCAGGCC GACCAGGAGA CCCCTTTGCC CGCGCCGAGA TGTTGTTCGA GGCGATTGTC GGCCAGGGCG CCCGCCTGCC TTCGCAACGC CGCTTCGCTG CGCGCGCGAA GTCGGAGGCC GAAGGCATCA CCCTGACCGC AGCCGAAGTC GAGCAACTCG ATCGGCTCCT TACGCTCGGG CTCGACGCCG TGGCGTAA
|
Protein sequence | MSETTTLTTT ALHERVEAIF RKGGLNVVQA GALARVIVAG ERDACKSHGI YRIEGALRTV KAGKVKPDAI PEIIAQEASA IVKVNAGGGF ANPAFELGLP VLAERARTQG IAALAINDCT HFSALWPEAE ALTGEGLAGL VMCPSYATVA PTGGNKPLLG TNPFAFGWPR AGRPPYVFDF ATSVAARGEI ELHRRAGKAL PDGWAIDAKG NPTTDPEAAL AGAMLPFGGH KGSAIGTMIE LLAGIMIGDL TSPEVLDYLG TTTLAPFHGE LIIAFSPEAF AAGRPGDPFA RAEMLFEAIV GQGARLPSQR RFAARAKSEA EGITLTAAEV EQLDRLLTLG LDAVA
|
| |