| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3869 |
|---|
| Symbol | |
|---|
| ID | 5318868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 325740 |
|---|
| End bp | 327257 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640775681 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001312614 |
|---|
| Protein GI | 150376018 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTCA CCCCCAAAGG AAAACACCTC GTCGCGGGCG AATGGCTCGA CGGAGCCGGC
ACCTTCGCTT CAGCTCCGGC GCACGGCCCG GCGCATGATT TTGCCGTAGG CACCGTGGAG
CTGGTAAACC GGGCCTGTGA CGCTGCCGAA GAGGCTTTCT GGAGCTATGG CTATTCCTCG
CGCAAAGAGC GCGCCGCCTT CCTGCGCGCC ATCGCCGACG AGATCGAGGC CCGTGCGGAA
GCTATAACCG ACATCGGCAG CCAGGAAACA GGGCTGCCGG AGGCAAGGCT CAATGGCGAA
AGGGGCCGCA CCACCGGACA ACTCCGGCTT TTCGCCGATC ATATCGAAAA GGGTGATTAT
CTCGATCGCC GCGTCGATGC CGCGCTGCCT GACCGCCAGC CGGCGCCACG TCAGGAGATC
CGGTTGATCC AGCGCCCGGT CGGCCCGGTT GCCGTCTTCG GTGCCTCGAA TTTCCCGCTG
GCTTTTTCGA CCGCCGGCGG CGATACCGCG GCGGCGCTCG CAGCGGGTTG CCCCGTCGTG
GTAAAGGGTC ATTCGGCGCA TCCCGGCACC GGTGAGATCG TGGCTGAGGC GATCGACGCC
GCAATTCGCA AGACGGGGGT TCATCCCGGC GTGTTCTCGC TAATCCAGGG CGGCAGCCGC
GATGTCGGTC ACGCTCTGGT TCAGCATCCG AATATCAAGG CCGTCGGCTT CACCGGCTCG
CTCGCCGGCG GACGTGCACT GTTCGATCTT TGCGCCGCGC GTCCCGAGCC GATCCCGTTC
TTCGGCGAGC TCGGCTCGGT CAATCCGATG TTCCTGCTTC CGGAAGCCTT GAAGGCGCGG
GCCGAAGCTT TGGGGCAGGG ATGGGCCGGG TCGCTCACCA TGGGAGCCGG GCAGTTCTGC
ACCAATCCGG GAATAGCTGT CGTCATCGAA GGAACCGACG CGGACCGCTT CACCACCACC
GCCGCCGAGG CGCTTGCCAA GGTGGCGCCG CAAACCATGC TGACCGACGG GATCGCCAAG
GCCTACCGCG ACGGTCAGGA ACGGTTCGCG ACGCGCAACG CCGTAAAGCC GCTGCTTGCA
ACCGAGTCGT CCGGCCGTGA TGCGTCCCCC AATCTCTTCG AGACGACGGG TGAGCAGTTC
CTCTCCGACC ACGCGCTCGG CGAAGAAGTG TTCGGCCCGC TCGGCCTGGT GATCCGGGTC
GGATCGCCGG CCGAGATGGA AGAGCTCGCA CGTGGCTTCG CCGGCCAGCT GACCGCGACC
ATTCATATGG ATGCGGGCGA TCTGGAAACC GCGCGCCGGT TGCGCCCCGT GCTCGAACGG
AAAGCCGGCC GGGTCCTGGT CAACGGCTTC CCGACAGGCG TCGAAGTCGT CGACTCCATG
GTGCATGGAG GCCCGTATCC GGCCTCGACC AATTTTGGCG CAACCAGCGT CGGGACGATG
TCGATTCGAC GTTTCCTGCG CCCTGTGGCT TACCAGAACA TGCCGGAAGA CCTGCTGCCC
GAGGACTTCC TCGCCTGA
|
|---|
| Protein sequence | MVFTPKGKHL VAGEWLDGAG TFASAPAHGP AHDFAVGTVE LVNRACDAAE EAFWSYGYSS
RKERAAFLRA IADEIEARAE AITDIGSQET GLPEARLNGE RGRTTGQLRL FADHIEKGDY
LDRRVDAALP DRQPAPRQEI RLIQRPVGPV AVFGASNFPL AFSTAGGDTA AALAAGCPVV
VKGHSAHPGT GEIVAEAIDA AIRKTGVHPG VFSLIQGGSR DVGHALVQHP NIKAVGFTGS
LAGGRALFDL CAARPEPIPF FGELGSVNPM FLLPEALKAR AEALGQGWAG SLTMGAGQFC
TNPGIAVVIE GTDADRFTTT AAEALAKVAP QTMLTDGIAK AYRDGQERFA TRNAVKPLLA
TESSGRDASP NLFETTGEQF LSDHALGEEV FGPLGLVIRV GSPAEMEELA RGFAGQLTAT
IHMDAGDLET ARRLRPVLER KAGRVLVNGF PTGVEVVDSM VHGGPYPAST NFGATSVGTM
SIRRFLRPVA YQNMPEDLLP EDFLA
|
|---|
| |