| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3867 |
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| Symbol | |
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| ID | 5318866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 324018 |
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| End bp | 324683 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775679 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001312612 |
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| Protein GI | 150376016 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATT ACACCTTCCA TTGGAACCAG GCGCTGAGGG CACTGCCGCA GATGCTCGAC
GGCGCGGTGG TGACGCTGCA GGTCGCGGTG CTGTCGATGG TCATCGGCGT CGCCTGCGCA
ATCGCGCTCA CGGTGTTCCG CCTGTCCGGC AGCCGTATCC TAGGCGGCAT CGCCACGACC
TGGGTCGAGG TCGCGCGGAA CACGCCGGCG CTGTTCCAGA TCTACATGGC CCATTTCGGC
CTCGGCAATT TCGGCATTCA CCTGAGCCCC TACACGGCAC TCCTGGTCGG GATCGCTTTC
AACAATGCCG GCTATCTGGC CGAGAATTTC CGTGGTGCGT TGAAGGCCAT TCCGGACACG
CAGGCCCGCG CCGGCCGGTC GCTCGGCATG ACCTCCCTGC AGGCATTCCG ACTGATCGTT
CTGCCGCAGA TGCTGCGCGT CGCTTTCCTG CCTGCGACCA ACCAGATGGT CTGGGCGATC
CTGATGACGT CGCTCGGCGT CACCGTCGGC ATGAACACCG ATCTCGCCGG AATCACGCAG
GAGCTGAATG CCCGCTCCTT CCGAACCTTC GAATTCTTCG CGCTCGCCGC GGTGATCTAT
TACCTGATCG CCAAGGCCGT CACGCTCGCT GCCCGGGCTT TCGCCTGGCG CATGTTCCGT
TACTGA
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| Protein sequence | MFNYTFHWNQ ALRALPQMLD GAVVTLQVAV LSMVIGVACA IALTVFRLSG SRILGGIATT
WVEVARNTPA LFQIYMAHFG LGNFGIHLSP YTALLVGIAF NNAGYLAENF RGALKAIPDT
QARAGRSLGM TSLQAFRLIV LPQMLRVAFL PATNQMVWAI LMTSLGVTVG MNTDLAGITQ
ELNARSFRTF EFFALAAVIY YLIAKAVTLA ARAFAWRMFR Y
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