Gene Smed_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3860 
Symbol 
ID5318297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp317093 
End bp317524 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content63% 
IMG OID640775672 
ProductOsmC family protein 
Protein accessionYP_001312605 
Protein GI150376009 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.598939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.840691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAC GCATCAAATG GGTCGAAGGC AGGACCTTCG TCGGCGAATC CGGCAGCGGG 
CACAAGGTCG TGCTCGGCAC GGCCACCGGC CCGGACGGCC CCACACCGGG GCCGAGCCCC
ATGGAAATGG TGCTGATCGG CACCGGCGGT TGCTCGGCTT TCGACGTGGT CCACATCCTC
GAAAAGGGCC GCGAGGCAAT CGAGGATTGC GTCGTCGAGT TGGACGCAGA CCGCGCGGAG
CAGGACCCGC GCGTTTTCAC CCGCATTCAC ATGCATTTCA TCGTCAAAGG CCGTGGCCTT
GCCGCCAAGA AGGTCGAGCG CGCGGTTGCC CTGTCCATCG AAAAATACTG CTCGGCGTCG
GCTATGCTCG CAAAGACGGC GACCATCACG CATGATTTCG AGGTCGTCGA TACATCGATC
ATGGCGGGCT GA
 
Protein sequence
MKARIKWVEG RTFVGESGSG HKVVLGTATG PDGPTPGPSP MEMVLIGTGG CSAFDVVHIL 
EKGREAIEDC VVELDADRAE QDPRVFTRIH MHFIVKGRGL AAKKVERAVA LSIEKYCSAS
AMLAKTATIT HDFEVVDTSI MAG