Gene Smed_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3844 
Symbol 
ID5318572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp301805 
End bp302512 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID640775656 
Producthypothetical protein 
Protein accessionYP_001312589 
Protein GI150375993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA GCCTTTTTGC GATTTTGAGC GCGGTCACAT TGGTCTCGGC ATTTATCCAG 
GGTGCTCTCG GCATCGGCTT CGCGCTCATC GTGGCGCCGG TCGTCGGCAT CCTGCAGCCC
GATCTCCTGC CGGTGACGCT GCTTCTCTTG ATGCTGCCTC TCAATCTCCA CGTCGCCTGG
CGCGAGCGGT CGGCCGTCGA TTGGTCCGGC GCGAAATGGA TCAGCCTCGG CAGGTTCGCC
GGCACCTTTG CCGGCGTGTG GCTGCTCGCC GCCTTGTCGA GCCAGCAGCT CGACCTTGCC
GTCGGCTGGT TTACGGTCAT TGCCGCCGCC GCAGCGCTTT TCGCCCCCCC CTTTGCGCCC
GGTCGACCGA GCGCGCTCGG TGTCGGCTTG TTCACCGGCG TAACCGAAAC GGCGACCGGC
ATCGGCGGGC CACCGCTCGC TCTCCTCTAC CAGCACGCCA AGGGCCCGAT ACTCCGGGCG
ACCGTGGCGG TGTGTTTCTT CGTGGGGGAA ATCATGTCGC TGGTCATACT CGCCATTGCC
GGCCGCATCG GAGCGGACCA GCTTCTGGCC GCTCTCTACC TCGCACCGGC GGTCCTCCTC
GGAAGCGCCC TGTCACGCCT GACGCACGAC CATATTCGCG GCCGCGGCCT GCGCTTGGGC
GTGCTTATCT TCGCGCTGGC CAGCGGAGCG TTTCTGATCG TGCGGTAG
 
Protein sequence
MTLSLFAILS AVTLVSAFIQ GALGIGFALI VAPVVGILQP DLLPVTLLLL MLPLNLHVAW 
RERSAVDWSG AKWISLGRFA GTFAGVWLLA ALSSQQLDLA VGWFTVIAAA AALFAPPFAP
GRPSALGVGL FTGVTETATG IGGPPLALLY QHAKGPILRA TVAVCFFVGE IMSLVILAIA
GRIGADQLLA ALYLAPAVLL GSALSRLTHD HIRGRGLRLG VLIFALASGA FLIVR