Gene Smed_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3838 
Symbol 
ID5318566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp293484 
End bp294047 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content58% 
IMG OID640775650 
Producthypothetical protein 
Protein accessionYP_001312583 
Protein GI150375987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0103581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGAT CGTTGCGCTT TATCAAGCAA GGGGGGTATT TGCGTAAATC GGCGTGTTGC 
CGGATGTCAG CCGATCGGTG GCATTCTCTC GATAGCCGTG GCGAATTTCC GTGGCAATCT
CCCATAATCG GTCCGCCGGA ATGCGGCGTT GGGGGAACCA AGGCCATGTC AGGATGTTTC
CTCCCATCTA ACGGGAGCAC CGCCATGGCA ACAATACGAT ATGAAATTGT AGAGCACGAC
GGGGGCTGGG CTTACAAAGT GGACGACGTC TTTTCCGAAG CTTTCGCCAC TCACGCCGAT
GCTCTGGCTG CAGCCGAGAT CGCCGCGCGC CATCATGAGC TTCCCGGCTC GACCGAGGAG
ATCGAGTTTC AGGATACCGA CGGCCGGTGG CATGAGCAGG TTGCGTCCGG CTTCGATCGT
CCGCACACCA AGGTCGTTGA TACGCCGGAA GAGAGGAATG TCGGGGAGCG CCCAAGCGCC
GCCGAACCTC GCAGCTCCCT CCAGACTTTT TTGTTACTCG CCGGCCTCGG CCTCGCGATC
GGATATTTTG TTCGTCGGCA TTGA
 
Protein sequence
MLRSLRFIKQ GGYLRKSACC RMSADRWHSL DSRGEFPWQS PIIGPPECGV GGTKAMSGCF 
LPSNGSTAMA TIRYEIVEHD GGWAYKVDDV FSEAFATHAD ALAAAEIAAR HHELPGSTEE
IEFQDTDGRW HEQVASGFDR PHTKVVDTPE ERNVGERPSA AEPRSSLQTF LLLAGLGLAI
GYFVRRH