| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3836 |
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| Symbol | |
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| ID | 5318544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 291530 |
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| End bp | 292501 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640775648 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001312581 |
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| Protein GI | 150375985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0128517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG GATTGATTTC GCTCGCGCTT GCGGGGCTGC TCATGGCTTC GCAAGCCATG
GCTCAAGAGG CGCGCACGCT GCGCCTGGGG ATGCAAGGCA CGGCCGGGGA CCCGCAATTC
GAGGGTGTCA CCGAGGCCGC GCGCATCATC AAGGAAAAGT CCGGCGGTCG GCTGACGCTG
GAAATCTTCC CCAATTCGCA ACTCGGCACC TTTACCGAGA TGATGGAGCA GGTGACACTC
GGCGAACTCG ACTTCACGCT CAATCCATTC GGGGGCATGG ATGCCTGGGT TCCCCGGGCC
GTGTTGGCGA GTACTGCCTA TGTCGTCGGC GACTTCGAGC ATCTTCAAAA GATCATCGCC
TCGGACTGGG GCAAGGGGAT CGTCGACGAA TTGCGAACCG AGCACAAGTG GCGCATGGTC
GACTCCTGGT ATTTCGGAAC GCGGCACACG ACGGCAAAGA AGCCCATCGA AAAGCCTGCG
GATTTCAACG GCATGAAGCT GCGCGTACCG AATTCCGCGC CGCTTCTGAC CTGGGCGAAG
GCAATGGGCG CGAGCCCGAC CCCGGTCGCG TTCGCCGAAG TCTATCTGGC GCTCCAGACC
AATCAGGTGG ATGGTCAGGA AAACCCGCTG CCGATCATCG ACTCGATGAA ATTCACCGAG
GTGCAGACCC ATGTTTCGTT GACCGGGCAT CTGGTGCAGG ACCAGGTCGT CCTCATGTCG
GAGGATACGT GGAATGCGCT TGATCCCTCC GATCAGAAAC TCGTCATGGA GGCATTCGAG
GCTGGCGGGG CCCTCAACGA CAAGCTGGTT GCCAATAAGG AAACGAGTCT CGTCAGCGAT
TTTCGTGAGC GCGGAATCAC CGTGGTCGAA CCCGACAAGG CAGCTTTCCA GGAGGCGATG
AAGCCCGTCT ATGCCGATCT CGATGCGAGG TTCGGCGCGG GCACGGTACA GACGCTGCTC
GATCTCCGAT AA
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| Protein sequence | MKKGLISLAL AGLLMASQAM AQEARTLRLG MQGTAGDPQF EGVTEAARII KEKSGGRLTL
EIFPNSQLGT FTEMMEQVTL GELDFTLNPF GGMDAWVPRA VLASTAYVVG DFEHLQKIIA
SDWGKGIVDE LRTEHKWRMV DSWYFGTRHT TAKKPIEKPA DFNGMKLRVP NSAPLLTWAK
AMGASPTPVA FAEVYLALQT NQVDGQENPL PIIDSMKFTE VQTHVSLTGH LVQDQVVLMS
EDTWNALDPS DQKLVMEAFE AGGALNDKLV ANKETSLVSD FRERGITVVE PDKAAFQEAM
KPVYADLDAR FGAGTVQTLL DLR
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