| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3817 |
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| Symbol | |
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| ID | 5318371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 270446 |
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| End bp | 271441 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775629 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001312562 |
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| Protein GI | 150375966 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTT CCCGCAGAAC TTTCCTTGGC GGCATCGCCG CCGGCACAGC ACTCTCGCTC
GCTACGCCAT CGCTCGTTCG CGCACAGGAA ACGCGTACGC TTCGCCTTGG TATCGTCACG
CCGCCCGGGC ACCCGTGGAA CAACGCCGCT CTCAAGGTGG GTGAAGGTCT CAAGGCTGAA
ACGAACGGCC GCCTTTCGCT CTCGGTCTTC CCCGCCGGCC AGCTCGGAAA CGAAGCGGCC
ATGCTGCAGC AGATGCAGAG CGGCGCGCTC GATCTCGGCT GGATCATGAC CGCCGAACTC
GGCTCGCGCA TTCCGGCGAT CGCCGCGATC AACGCGCCCT GGGTGGTGGA TTCGACCGCC
AAGGTCGCAA AACTCGTACG CGAGCCGCTC GCTATGAAGC TCCTCGATGT TCTGCCGGCC
GAGACCGGCA CGGTCGGCCT TGCATGGGGC ATAACCACCA TGCGCGTCGT CTTCTCGGCC
AGGGAGATCG CCGGCCTTGA CGACATCAAC GGTATGAAGT TGCGCATCAA TACGACGCCG
GCCTACCGGG ATTTCTACCA GCTCCTCGGC GCCGCACCGA CGCCCATCCC GACACCTGCG
GTTTTCGACG CTATGTCGAA CGGCCAGGTG GACGGTCTGG AGGCGGACCT CGACTTCTCC
TGGAACCAGC GCTTCGACAA GGTTTCGAAG ACCATGCTGA AGATGAATGC CATCTTCATG
CCCTGCGTCG CGCTTGCCTC GGGCCGCGCC TGGCAGACCC TTTCCGCCGC CGACCGCGAA
ATCATCACGC GTCTCACCAA GGCAGCCCTT GATGAACAGA TCGATGCAAC GGTCGCCAAC
GAGCCGGCGC TCCTCGAAAA ATTTGCCGGG GCAGGCATTC CGATCAAGGA TATCACCGTC
GCCGACGCCA GCCGCATCAT CGCTGAATAC GACAAGATCT GGCTGCCGAA GGCACCGGTT
CTCGCCGAGT TGCGCAAAGT CGGCGCAACC CTCTGA
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| Protein sequence | MTVSRRTFLG GIAAGTALSL ATPSLVRAQE TRTLRLGIVT PPGHPWNNAA LKVGEGLKAE
TNGRLSLSVF PAGQLGNEAA MLQQMQSGAL DLGWIMTAEL GSRIPAIAAI NAPWVVDSTA
KVAKLVREPL AMKLLDVLPA ETGTVGLAWG ITTMRVVFSA REIAGLDDIN GMKLRINTTP
AYRDFYQLLG AAPTPIPTPA VFDAMSNGQV DGLEADLDFS WNQRFDKVSK TMLKMNAIFM
PCVALASGRA WQTLSAADRE IITRLTKAAL DEQIDATVAN EPALLEKFAG AGIPIKDITV
ADASRIIAEY DKIWLPKAPV LAELRKVGAT L
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