| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3814 |
|---|
| Symbol | |
|---|
| ID | 5318368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 267768 |
|---|
| End bp | 268457 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640775626 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001312559 |
|---|
| Protein GI | 150375963 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCAC ATCTGAAACA TCGCACCCTC TCAGGCGCAC TCATCGAGGA AATACGGCAG
GCGATCCTGT CGGGCCGATA CCCGGCCGGC AGTCAATTGC GCCAGGATGC GCTGGCTGAA
ACCTATGGCG TCAGCCGCAT TCCCGTGCGC GAGGTTCTCT TTCAACTCGA GGCTGAAGGT
CTGGTCAGGA TCGTGCCGCA GAAGGGAGCC ATCGTCTCCG AACTGTCGCT TGCCGAAATC
GACGATGTCT TCGAACTGCG CGCTCTCCTC GAACCGCGGC TCCTGCGAAA ATCGGCGCCT
CTTCTCGACG GCGACGATTT TGCGCGCCTG GACGAGGCTC AGAACCGCTT TCTTAAAGCC
ACGACGGCGG GCGAAATTGA TTCATACGGT CAGCTCAATG CCGAACTGCA CATGGTACTG
TACCGGCGTG CCGACATGCC GCGAACGCAG CAGATCGTCG CCTCGCTGCT ACAGACGAGC
GACCGTTACA CGCGCGTCCA GCTATCGAGC GTCGCAGCGA TGACCCGGGC GATGGAAGAA
CATGCCGAGC TGATCCGCCT TTGCCGGGCA GGCGCCTTCG AAGAGGCGTC CGCTTTCCTG
GTTTTCCACC TCAAGGCAGT CCACGAAGAC CTGCTGTTCC GGCTGAACGG TCGCGAGGAT
GCCCCGGCGA TGGAGGGTGG AGCAGGATGA
|
|---|
| Protein sequence | MASHLKHRTL SGALIEEIRQ AILSGRYPAG SQLRQDALAE TYGVSRIPVR EVLFQLEAEG
LVRIVPQKGA IVSELSLAEI DDVFELRALL EPRLLRKSAP LLDGDDFARL DEAQNRFLKA
TTAGEIDSYG QLNAELHMVL YRRADMPRTQ QIVASLLQTS DRYTRVQLSS VAAMTRAMEE
HAELIRLCRA GAFEEASAFL VFHLKAVHED LLFRLNGRED APAMEGGAG
|
|---|
| |