Gene Smed_3807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3807 
Symbol 
ID5318105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp259774 
End bp260856 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID640775619 
Productoxidoreductase domain-containing protein 
Protein accessionYP_001312552 
Protein GI150375956 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGC TTATTCTCGG AACCGGCGGC ATGGCCAACA GTCATGCGAA AGCCTTTGCT 
GAGATCGAAG GCGTCGAAAT GGTCGGCGCA GTCGACGTCG ACCCGTCCCG TGCCCGGGCC
TTCGCTTCCA CGCACGGCAT CGAACGTACT TTCACATCCC TCGACGAGGC GATTGCCTGG
GGAGAGTTCG ATGCGGCGAC GAACGTGACG CCCGACAAGG CCCATCACCC CACGACGCTT
GCCCTCATCG CAGCCGGCAA GCATGTGCTT TGCGAAAAGC CGCTGGCCGA AAATTACGAG
AAGGCCGCCG AGATGGCGGC CGCGGCCGAG CGCGCCGGCC TCGTCACCAT GGTCAATCTC
ACCTACCGCA ATGTCGCACC GCTGCAGAAG GCGCGCGAAC TGGTCGTCGC CGGCGAAATC
GGCCTGGTGC GCCATCTCGA AGCCTCCTAT CTCCAAAGCT GGCTGGTGTC GAAGGCTTGG
GGCGACTGGG CGAGCGAGTC CAAATGGCTG TGGCGCCTCT CCACGAAACA TGGCTCGAAT
GGCGTGCTCG GCGATGTCGG CATACACATT CTCGACTTTG CCGGCTATGG GGCAAACAGC
TCGGTCGAAA GGGTCTTTGC GCGCCTGAAG GCCTTCGACA AAGCCCCGGG CAACCGGTTA
GGCGAATACG ATCTCGATGC CAATGACAGC TTTGCCATGA CGGCCGAATT TGAAAACGGT
GCGATGGCGG TGATCCACGC GAGCCGTTGG GCGACAGGCC ATCTGAACGA GCTGAGGCTC
AGGTTGCACG GGGACAAAGG TGCGCTGGAG GTCATTCATA CGCCGGACGG TTCGAGCCTG
CGCGCCTGCC TGGGCGCCGA CGTTGAAAAG GCAGTGTGGA GGACAGTCGA TGCCGGCACC
GTGCCGACCA ACTACCAGCG CTTCGTCGAG GCGGTGAAGG CCGGCCGAAC CGTCGAGCCG
GGTTTCCGCC ATGCCGCTGA CCTGCAGAAG GTGCTGGATC TCGCCATAGA GACCGAACGT
GAACGCCGCG AACTCGGTGT TCCTGACATC GACGCGGTCG TGCAGGAGCG CGCGGTGGGA
TAA
 
Protein sequence
MRLLILGTGG MANSHAKAFA EIEGVEMVGA VDVDPSRARA FASTHGIERT FTSLDEAIAW 
GEFDAATNVT PDKAHHPTTL ALIAAGKHVL CEKPLAENYE KAAEMAAAAE RAGLVTMVNL
TYRNVAPLQK ARELVVAGEI GLVRHLEASY LQSWLVSKAW GDWASESKWL WRLSTKHGSN
GVLGDVGIHI LDFAGYGANS SVERVFARLK AFDKAPGNRL GEYDLDANDS FAMTAEFENG
AMAVIHASRW ATGHLNELRL RLHGDKGALE VIHTPDGSSL RACLGADVEK AVWRTVDAGT
VPTNYQRFVE AVKAGRTVEP GFRHAADLQK VLDLAIETER ERRELGVPDI DAVVQERAVG