Gene Smed_3792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3792 
Symbol 
ID5317993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp241865 
End bp242869 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID640775605 
Productnonspecific acid phosphatase precursor 
Protein accessionYP_001312538 
Protein GI150375942 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAAG TGACCCGCCG CTCGGCGATG AAAATCGCCG CGCTCGCCGC TGCAGCTTCG 
TCCATGGGCC AGGCTGCGTT TGCCGCCGAG CCTTCGATCC TGCCCTCTTG GGTCGATGGC
GACGCTAAGG CTCGCATCAT CGACTTCGTG TCGGCGACGA CCACAGAGGG CGGCCCCGAT
TTCGTCGAGC CGGCCGATCG CGTGGCGGTA TTCGACAATG ACGGAACACT ATGGGGCGAG
CAGCCCATGT ATGTACAGCT GGCCTTTGCA CTCGACCGCG TCAAGCAACT GGCGCCGCAG
CATTCCGAAT GGCAGACGAC GGAACCGTTC AAATCGGTGC TGGCTGGCGA CATGGCGGGT
GTCGCGGCCA GCGGCGAACG GGGACTGATC GAGCTTGTCG CCGCTACCCA TGCCGGCATG
TCCACGGAGG AATTCGAGAG GATCGTTTCC GACTGGATGG AAAGCGCCCG CCACCCGGCG
TCGGGAAAAC CCTATACCGC GCACATCTTC AAGCCGATGG TCGAATTGAT CGACTATTTG
AAGTCCAACC AGTTCGAGGT CTTTATCGTC TCGGGGGGCG GCGTGGAGTT CATGCGTCCG
TGGACCGAGC GCGTATACGG CATCCCGCCG CAGAACGTCG TCGGATCCAG CATAAAAACG
AGGTACGAGC TGCGCGACGG TGTTCCGGCG ATCATGCGTC TGCCGGAAAT CGACTTCATC
GACGACGGTC TGGGCAAGCC CGTCGGCATC AACAAATTCA TCGGCAGACG TCCGATCGCC
GCCTTTGGCA ATTCCGACGG CGATTTCGAG ATGCTGGAAT GGACGACTGC AGGCCCCGGA
CGCCGGTTCG GGCTGATCGT CCATCACGAC GACGCAGAGC GCGAGAAGGC TTACGACCGC
GACTCGCATT TTGGCCGGCT CGCGCGCGGC CTCGACGAGG CGCCCGCACG CGGTTGGACC
GTCGTCAGTA TCAAGGACGA CTGGAAGCTC GTTTACCCGG AGTGA
 
Protein sequence
MFQVTRRSAM KIAALAAAAS SMGQAAFAAE PSILPSWVDG DAKARIIDFV SATTTEGGPD 
FVEPADRVAV FDNDGTLWGE QPMYVQLAFA LDRVKQLAPQ HSEWQTTEPF KSVLAGDMAG
VAASGERGLI ELVAATHAGM STEEFERIVS DWMESARHPA SGKPYTAHIF KPMVELIDYL
KSNQFEVFIV SGGGVEFMRP WTERVYGIPP QNVVGSSIKT RYELRDGVPA IMRLPEIDFI
DDGLGKPVGI NKFIGRRPIA AFGNSDGDFE MLEWTTAGPG RRFGLIVHHD DAEREKAYDR
DSHFGRLARG LDEAPARGWT VVSIKDDWKL VYPE