| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3791 |
|---|
| Symbol | |
|---|
| ID | 5317992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 239958 |
|---|
| End bp | 241604 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640775604 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001312537 |
|---|
| Protein GI | 150375941 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.425915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG AACCGATTGC GGACCAGCGT GATCCACGCG AGCGCGCCAA TATCACGCGG
CGCAGCATTC TGCTTGGCGG GACTGCCATT GCCGCGGCAT CGACCGTACT GACAACCGGC
GGCGCGCAGA CCGCCCAGGC GCAGACGCAA ACGCAAGCGC CAGATGCCGG CGGGTCCGCC
AAGCAGCCGA ACATCCTGGT CATCTGGGGC GATGACATCG GCACCTGGAA TATCAGCCAT
AATAATCGTG GCATGATGGG CTATAAGACG CCGAACATCG ACCGGATCGC TCAGGAAGGC
TTGTCCTTCA CGGATTATTA CGGACAGCAG AGCTGCACGG CCGGGCGCGC CGCTTTCATT
GGCGGTAATG TACCGGTGCG CACCGGCATG ACCAAGGTCG GCCTCCCCGG CGCGAAGGAA
GGCTGGCAGG AGACGGATGT CACGATGGCA ACCGTTCTCA AGAGCCAGGG CTACGCGACG
GGCCAGTTCG GCAAGAACCA CCAGGGGGAC AGGGACGAGC ACCTGCCGAC CAATCACGGC
TTCGACGAGT TTTTCGGCAA CCTGTATCAC CTCAATGCGG AGGAGGAGCC GGAGAACCGC
GACTATCCGA AGGACCCGGA ATTCCGCCGT CGATTTGGCC CGCGCGGCGT GATCCATTCC
TTCGCCGACG GCAAGATCGA GGATACCGGC GCGCTCACCA AAAAGCGGAT GGAAACGATT
GACGAGGAGT CCCTTGCTGC GGCCAAGGAT TTCATTACGC GCCAGAACCA GGCAGGCACG
CCCTTCTTCG TCTGGTGGAA CGGCACGCGC ATGCATTTCA GAACACATGT CAAGGCGGAA
CATGCCGGCA TATCGGGGCC AAGCGGCGAC GAGTATCACG ATGGTATGGT CGAACATGAC
ATGCATGTCG GCGAGTTGCT CAAGCTCCTC GACGAACTCG GTATCGCCGA AAATACTGTG
GTCATGTATT CGACCGACAA TGGACCTCAT TTCAACACAT GGCCGGATGC CGCCACGACG
CCGTTCAGGA GCGAAAAGAA CTCGAACTGG GAAGGCGCCT ATCGCGTTCC GGCTTTCGTG
CGCTGGCCGG CCCGGTTCCC GGCAGGCAAG ACTCTCAACG GTATCGTTGC TCATGAGGAT
TGGCTGCCTA CGTTTGGCGC GATTGCCGGT GCACCGGACG TCAAGGAAAA GCTCCTGGAG
GGTGTCGAAC TCAACGGCCG CCGCTATCGC AACTATATCG ACGGCTACAA TCAGCTCGAA
TATCTGGAAG GCAAGACCGA CCAGTCGCCG CGTCACGAGT TCTGGTACGT GAATGACGAC
GGGCAGGTCG TCGCCGCGCG CTACGACGAC TGGAAAGTGG TATTCCTCGA GAATCGCGGC
GAAGCCTTCG GCGTCTGGCG CGAACCCTTT ACCGAATTGC GCGTGCCGCT CTTGTTCAAC
CTGCGACGCG ACCCCTTCGA GAAGGCGCAG CACAACGCCA ACACCTATGA TGACTGGTTC
CTTGAACGGG CCTTCGTCGT GGTGCCGATC CAGGGTCTGG CGGCGAAGTT CCTGCAGACG
ATGAAGGAAT ATCCGCCAAG CCAGTCACCC GGTTCCTTCA ATCTCACCAA AATCGAAGAG
AGCCTGAAGG CCGGGATGAG AAACTAA
|
|---|
| Protein sequence | MKKEPIADQR DPRERANITR RSILLGGTAI AAASTVLTTG GAQTAQAQTQ TQAPDAGGSA
KQPNILVIWG DDIGTWNISH NNRGMMGYKT PNIDRIAQEG LSFTDYYGQQ SCTAGRAAFI
GGNVPVRTGM TKVGLPGAKE GWQETDVTMA TVLKSQGYAT GQFGKNHQGD RDEHLPTNHG
FDEFFGNLYH LNAEEEPENR DYPKDPEFRR RFGPRGVIHS FADGKIEDTG ALTKKRMETI
DEESLAAAKD FITRQNQAGT PFFVWWNGTR MHFRTHVKAE HAGISGPSGD EYHDGMVEHD
MHVGELLKLL DELGIAENTV VMYSTDNGPH FNTWPDAATT PFRSEKNSNW EGAYRVPAFV
RWPARFPAGK TLNGIVAHED WLPTFGAIAG APDVKEKLLE GVELNGRRYR NYIDGYNQLE
YLEGKTDQSP RHEFWYVNDD GQVVAARYDD WKVVFLENRG EAFGVWREPF TELRVPLLFN
LRRDPFEKAQ HNANTYDDWF LERAFVVVPI QGLAAKFLQT MKEYPPSQSP GSFNLTKIEE
SLKAGMRN
|
|---|
| |