Gene Smed_3766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3766 
Symbol 
ID5319058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp211541 
End bp212599 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content62% 
IMG OID640775579 
Productoxidoreductase domain-containing protein 
Protein accessionYP_001312512 
Protein GI150375916 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACC TTAAAGGCGC GCTGATCGGC TGCGGCTTCT TCGCCGTGAA CCAGATGCAT 
GGCTGGCGTG ACGCCGAAGG GGCGCGGATC GTCTCCATCT GCGATCGCGA TCCCGAGAGA
CTGAGGGCCG TCGGTGACGA GTTCGGCATC ACCCGCCGCT ATCTATCCGT AGACGACCTC
TTTGCCGATG GCGGCTTCGA TTTCGTCGAC ATTGCCACGA CCGTGGGAAG CCACCGGTCG
CTGGTGGAAC TGGCCGCACG ACACGGGATC GCGACAATCT GCCAGAAGCC GATCGCGCCA
ACCATGGAGG ACGCCGAGGC AATGGTCGAA GCCTGCGCGA AGGCAGGGGT CCCATTCATG
GTACATGAGA ACTTCCGATG GCAGTCGCCG ATACGGGCGG TTAAGGCGGC GATCGACAGC
GGCACGGTCG GGGAGGTGTT CTGGGGGCGG GTGAGCTTTC GATCGGGCTA TGACGTCTTT
TCCGGCCAGC CCTATCTAGC AACGGGCAAG CGTTTCATTA TCGAGGACCT TGGGATCCAT
GCACTCGATG TCGCGCGCTA CATCTTCGGC GATGCGACAG CGGTGACGGC GCGCACGCGG
CGGGTCAATC CGGCGATCGC CGGCGAGGAT GTCGCGACGA TGCTCCTGGA TCATGAAGGG
GCGATCACCT CCATCGTGGA CTGCAGCTAT GCGACCAGGT TGCCGATCGA GCCCTTTCCG
GAAACCCTGA TCGAGGTTGA CGGAAGCAAG GGCACCCTGC GGCTTTCGCA GGGCTATCAC
CTCACCATGC ATTCGAAGGA CGGCACGAAA GTCACGAATG TGGAGCCGCC GGTTCTTTCC
TGGGCGGCGC CTCCTTGGCA CAACATCCAG GAAAGCGTCT CACGCATCCA GCAGCATTGG
GTGGAAGCCT TGCGTGCCGG GCGCGAGCCG GATACGTCCG GCCTGGATAA TCTGGAGACC
TTCGCTTTGG TGGAGGCGTC GTATCTCAGC GCCGCCGAAG GCAGGACCGT TTCATTGGCG
GAGGTCATTG GAAGGCGCCC AAGTCAGTTC TCCAGGTGA
 
Protein sequence
MADLKGALIG CGFFAVNQMH GWRDAEGARI VSICDRDPER LRAVGDEFGI TRRYLSVDDL 
FADGGFDFVD IATTVGSHRS LVELAARHGI ATICQKPIAP TMEDAEAMVE ACAKAGVPFM
VHENFRWQSP IRAVKAAIDS GTVGEVFWGR VSFRSGYDVF SGQPYLATGK RFIIEDLGIH
ALDVARYIFG DATAVTARTR RVNPAIAGED VATMLLDHEG AITSIVDCSY ATRLPIEPFP
ETLIEVDGSK GTLRLSQGYH LTMHSKDGTK VTNVEPPVLS WAAPPWHNIQ ESVSRIQQHW
VEALRAGREP DTSGLDNLET FALVEASYLS AAEGRTVSLA EVIGRRPSQF SR