| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3749 |
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| Symbol | |
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| ID | 5318739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 192151 |
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| End bp | 193173 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775562 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001312495 |
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| Protein GI | 150375899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTCGA AGCAGCAGAT GAGGCGATAT GTGGTGGCTG TTGCTGCAGC CGCCGCTGTC
GGTGCCGCGG CTTTTTGGTA TGCCCTACGG CCGGTGCCCC TTTCAGTCGT GGCCCCAAAG
CGTGGTGATG CCGCGGAGAT AGTCTATGCC AGCGGCGTTG TAGAGCCCCG CGTCTGGGCC
AAGGTAACGT CGACCGTGCG CGAGCGGATC GTCGAGCAGT GCAACTGCGA AGGCGAACGT
GTGGAGACGG GCGACGCGCT CGCGCGGTTG GACGACACGG AGGCGCAGGC GATACTGGGC
GAACTGCAGG CACGCTTGTC TCTTGCGCAA GAAGAATATC GGCGCAAGCT CGCTTTGGCC
GAAAGAAATA CGATCAGCGA GCAGACGGTG GACCGGGCGC GCACCGACGT TGCTCAATTG
GAAGCCTTGA TAGCCGGCCA GGAGGCACGG CTCGCGGCCT ACGTACTGCG CGCGCCCAGT
GCCGGACGAG TGCTTCGGCA GGATGGAGAG ATCGGCGAAG TGGCCGAACT CGGGACCGTT
CTCTTCTGGG TCGGCGAGCC GCGGCCGCTG ATCGTCGAAG CCGAGGTCAA CGAGGAAGAT
ATTCCCCGCG TCGAGGTTGG ACAGAAGGCC TATCTTCGCT CCGATGTCTT CCCGGAGCGC
GCACTTGAGG CGGTTGTCGA CAGCATTACG CCGAAGGGGG ATCCTGTGAC GAAGACCTAC
CGTGTTCGTC TGGGTCTGCC GGAGGACACG CCGCTCAGAA TCGGCATGTC GACCGATGTG
AACATCGTGG TCCGGCTGTC GCGCAACGCA CTGATCATTC CTGCGGCGGC GGTGAGCGGC
ACGAAAGTCG CGGTGGTCAA AAGCAGGAAG GCGATGCTGC GCGAGATCAA GACAGGCATC
CGGGGCACGA ACGGCGTCGA AGTCCTCTCC GGCCTTGAGG AATCGGAGCG AATAATCTCG
CCCTTGCCCC CTGATCTTGC CGACGGCACG CGGGTGGATG TGGTGCGAAC AGAGGCGAAA
TGA
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| Protein sequence | MRSKQQMRRY VVAVAAAAAV GAAAFWYALR PVPLSVVAPK RGDAAEIVYA SGVVEPRVWA
KVTSTVRERI VEQCNCEGER VETGDALARL DDTEAQAILG ELQARLSLAQ EEYRRKLALA
ERNTISEQTV DRARTDVAQL EALIAGQEAR LAAYVLRAPS AGRVLRQDGE IGEVAELGTV
LFWVGEPRPL IVEAEVNEED IPRVEVGQKA YLRSDVFPER ALEAVVDSIT PKGDPVTKTY
RVRLGLPEDT PLRIGMSTDV NIVVRLSRNA LIIPAAAVSG TKVAVVKSRK AMLREIKTGI
RGTNGVEVLS GLEESERIIS PLPPDLADGT RVDVVRTEAK
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