| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3746 |
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| Symbol | |
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| ID | 5318736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 189745 |
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| End bp | 190191 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775559 |
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| Product | ribose-5-phosphate isomerase B |
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| Protein accession | YP_001312492 |
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| Protein GI | 150375896 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
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| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.307071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATCG TCATCGGCTC CGACCATGCC GGCTTCCCCC TCAAGGCCAC CATTATCGAC
CACATCGTCT CGCTCGGCCA CGAGGTTCAC GACGCAGGCT CTTACGACCC GAGCCCCGTG
GATTTTCCCG ACATCGCGAA GACGGTCACC TCTTCGATCA TAGACGGCAA GGCGGATCGT
GGGCTGATGG TCTGCGGCAC TGGCGTCGGC GCCTCGATCG CGGCGAACAA GGTCAAGGGG
ATTCGCGCAG CGGTCTGCCA TGACGTGCAT TCCGCTCATC AGTCGGTAGA ACACGACGAT
GTCAACGTCA TGTGCATTGG CGCCCAGATC GTCGGCGCAT GGCTCGCCAA GGACCTAGTC
GCAGCCTATC TGGCTGCCGA ATTCTCCACC GACGAAGACT TTCGACGCCG CGTGCGCAAG
CTGGCCGAAA TGGATGAGCA GCGCTGA
|
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| Protein sequence | MRIVIGSDHA GFPLKATIID HIVSLGHEVH DAGSYDPSPV DFPDIAKTVT SSIIDGKADR
GLMVCGTGVG ASIAANKVKG IRAAVCHDVH SAHQSVEHDD VNVMCIGAQI VGAWLAKDLV
AAYLAAEFST DEDFRRRVRK LAEMDEQR
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