| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3734 |
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| Symbol | |
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| ID | 5318662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 178111 |
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| End bp | 179184 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775547 |
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| Product | putative ABC transporter periplasmic solute-binding protein |
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| Protein accession | YP_001312480 |
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| Protein GI | 150375884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.22364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGT TCAAGAATGC ATCAGCCACG CCGCTATCGC GACGTGCCGT TCTCGGCGCC
GGACTTTTCG GGGCCGCAAT GCTGGCTTCC CCCTCTATCC GACGCGCCAG CGCGGAGGAG
AACGCCCTTT ATGTCAACAC CTGGGGCGGC GACTGGGAGG CATCGGTCAA GAAGTTCCTG
TTCGAGCCGT TTACGGCGGA TACGGGAATA GAGATCCGCA CAGTCTCGCC GATTTCCTTC
GCCAAGCTCG CGGCGCAGAA GACCACGGGC GTCTACGAGT TCGACGTCAC CACGCTCGGC
GTCGCAGACG TCGCGCGCGC CAATGGGGCG GGCCTACTCG AGACGCTGGA AGGTCACGTC
GACACCTCCA AGCTTTGGGA AGGCGCCATC TACGAAAACG GGCTGGCAAC GCATGGCTTT
GCCACGCAGA TGGCCTACAA TGCCGCTAAA TTCCCTGAAG GGCTGAAGAA CTGGTCCGAT
TTCTTTAACG TCGAGAAGTT CCCAGGCAAC CGCAGCCTGC AGCGTCACGC CGCCCGCGTC
CTGGCGATCG CGCTGCTTGC CGACGGCGTT CCGGCCGACC AGCTCTTCCC CTACGACCTC
GACCGCGCCT TCGCCTCGCT CGACCGGATC AAAGACCATG TCCGCGTCTG GTGGACCGCC
GGGCCGCAGG CGCGGCAGAT CCTGACCGAC GGTGAAGTGG ACATGGCGGG GCTCTGGGAT
AGCGACGCCT TCGGCGCCAA GGAGGCTTCC AAGGAGCCGA TCGAAATTGT CTGGGACCAG
GCCGTCGTCG ACAAGGCCTG CTGGATCGTC GCCAAGGACA GCCCGCGTGC AGAAAACGGC
TTCAAGCTGA TCAGCCATAT CGGCCAGAAC GCCGAGGGGC TCGCAAAGTT CTGCATCGCG
GACCAGAACG GTCCGATGAA CCCGAAGTCG TTCGATTTCA TTCCAGCCGA GGTCGCGGCC
AGAATGCCGA CCCATCCGGA GCACCTCGCC CGGGCCGTCA TGCTGGACGG GGCGAAGCTG
CTGCCCCAGC TGCACGAGCT GTCCACCCGT TTCGAAAGCT GGGTCGGTAT CTGA
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| Protein sequence | MEMFKNASAT PLSRRAVLGA GLFGAAMLAS PSIRRASAEE NALYVNTWGG DWEASVKKFL
FEPFTADTGI EIRTVSPISF AKLAAQKTTG VYEFDVTTLG VADVARANGA GLLETLEGHV
DTSKLWEGAI YENGLATHGF ATQMAYNAAK FPEGLKNWSD FFNVEKFPGN RSLQRHAARV
LAIALLADGV PADQLFPYDL DRAFASLDRI KDHVRVWWTA GPQARQILTD GEVDMAGLWD
SDAFGAKEAS KEPIEIVWDQ AVVDKACWIV AKDSPRAENG FKLISHIGQN AEGLAKFCIA
DQNGPMNPKS FDFIPAEVAA RMPTHPEHLA RAVMLDGAKL LPQLHELSTR FESWVGI
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